RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CTBP2P56545 445 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 RPL18Q07020 188 aaKnown RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 TMPRSS11FQ6ZWK6 438 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 BCDIN3DQ7Z5W3 292 aaKnown RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 RPRMLQ8N4K4 120 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 BBC3Q96PG8 261 aaPredicted RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 PNPLA3Q9NST1 481 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 SHANK1Q9Y566 2161 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 MED12LQ86YW9 2145 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 PPP1R3DO95685 299 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ADAP00813 363 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 FPR3P25089 353 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ERVK-25P63136 954 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 MELKQ14680 651 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 SGCBQ16585 318 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 VASNQ6EMK4 673 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ACSM5Q6NUN0 579 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 NCCRP1Q6ZVX7 275 aaPredicted RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 NANOGNBQ7Z5D8 188 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 RNF113BQ8IZP6 322 aaKnown RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 OR4Q3Q8NH05 313 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 FNDC9Q8TBE3 224 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ACKR4Q9NPB9 350 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 TAS2R5Q9NYW4 299 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 PCDHGB7Q9Y5F8 929 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF462Q96JM2 2506 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 H7C1C5 153 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF208O43345 1280 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ASAH2BP0C7U1 165 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 GTF2E2P29084 291 aaKnown RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 LCN6P62502 163 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 FOXK2Q01167 660 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 PMS2P3Q13401 168 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 PTGES3Q15185 160 aaKnown RBP12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF620Q6ZNG0 422 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 TMPPEQ6ZT21 453 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 EMC6Q9BV81 110 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 DGCR6LQ9BY27 220 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 GPR52Q9Y2T5 361 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 RPL4P36578 427 aaKnown RBP12.03□□□□□ -0.48
PRPF39-202ENST00000424478 DLX5P56178 289 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 CARD18P57730 90 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 NPRL3Q12980 569 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 PON3Q15166 354 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 OTPQ5XKR4 325 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 CCDC71Q8IV32 467 aaPredicted RBP12.03□□□□□ -0.48
PRPF39-202ENST00000424478 CHERPQ8IWX8 916 aaKnown RBP12.03□□□□□ -0.48
PRPF39-202ENST00000424478 TAPBPLQ9BX59 468 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 C12orf10Q9HB07 376 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 TBC1D23Q9NUY8 699 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 MED29Q9NX70 200 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 FLNCQ14315 2725 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 AQP8O94778 261 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF708P17019 499 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 IFNGR2P38484 337 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 ZBED5Q49AG3 693 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF585AQ6P3V2 769 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 STK35Q8TDR2 534 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 FAR1Q8WVX9 515 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 RASD2Q96D21 266 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 WDYHV1Q96HA8 205 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 TXNDC15Q96J42 360 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 ADGRG7Q96K78 797 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 TUBA1CQ9BQE3 449 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 IFT27Q9BW83 186 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 RASSF1Q9NS23 344 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 USE1Q9NZ43 259 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 POFUT2Q9Y2G5 429 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 MYO7BQ6PIF6 2116 aa12.03□□□□□ -0.48
PRPF39-202ENST00000424478 RNF13O43567 381 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 OSMP13725 252 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 ELK4P28324 431 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 KLRB1Q12918 225 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 GINS1Q14691 196 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 NHSL2Q5HYW2 709 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 OR2V1Q8NHB1 315 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 MIB2Q96AX9 1013 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 ADI1Q9BV57 179 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 KATNB1Q9BVA0 655 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 FAM118AQ9NWS6 357 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 TUBD1Q9UJT1 453 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.48
PRPF39-202ENST00000424478 MS4A18H0YCH9 400 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 ERVH48-1M5A8F1 160 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 SMAD9O15198 467 aaKnown RBP12.02□□□□□ -0.49
PRPF39-202ENST00000424478 PTP4A3O75365 173 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 TGM6O95932 706 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 HIST1H2ABP04908 130 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 TPOP07202 933 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 CRISP1P54107 249 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 MS4A18Q3C1V0 323 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 CYB561A3Q8NBI2 242 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 ZPLD1Q8TCW7 415 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 OTULINQ96BN8 352 aa12.02□□□□□ -0.49
PRPF39-202ENST00000424478 IL4I1Q96RQ9 567 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms