RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 VAPBO95292 243 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PAPSS2O95340 614 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 FADS2O95864 444 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 BCL10O95999 233 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 C9P02748 559 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 FTH1P02794 183 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NR3C1P04150 777 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 C2P06681 752 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NUDT17P0C025 328 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZNF23P17027 643 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PGAM1P18669 254 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 MARK3P27448 753 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 CD82P27701 267 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 GNRHRP30968 328 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 CALCRP30988 508 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NTSR1P30989 418 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 KDELR2P33947 212 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ACVR1BP36896 505 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 HPCAL1P37235 193 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 RBM34P42696 430 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 NOVA1P51513 510 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 WNT4P56705 351 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 KLF3P57682 345 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 SELENOTP62341 195 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 DYNLL1P63167 89 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 PAX5Q02548 391 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 TLE4Q04727 773 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ELAVL2Q12926 359 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 TNXAQ16473 311 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 MEP1AQ16819 746 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ATP6V1FQ16864 119 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 EXOC3L2Q2M3D2 409 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZNF699Q32M78 642 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 SMIM21Q3B7S5 101 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZNF569Q5MCW4 686 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 LRIF1Q5T3J3 769 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 LGSNQ5TDP6 509 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 OR2G6Q5TZ20 316 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 OTUD1Q5VV17 481 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 OR4F3Q6IEY1 312 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 RNASEKQ6P5S7 137 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 DCUN1D2Q6PH85 259 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PRSS55Q6UWB4 352 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 BAIAP2L2Q6UXY1 529 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 RAD9BQ6WBX8 426 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 RNF165Q6ZSG1 346 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 FCRLAQ7L513 359 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 SLC16A9Q7RTY1 509 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 FAM220AQ7Z4H9 259 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 SCD5Q86SK9 330 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 MRPL52Q86TS9 123 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 NOXA1Q86UR1 476 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 SIAH3Q8IW03 269 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 DNAJC22Q8N4W6 341 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 DHRSXQ8N5I4 330 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 C12orf45Q8N5I9 185 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 AQP11Q8NBQ7 271 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 FBXO36Q8NEA4 188 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 FAM71CQ8NEG0 241 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZNF548Q8NEK5 533 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 OR4C5Q8NGB2 326 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 OR52N4Q8NGI2 321 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 OR9A4Q8NGU2 314 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PIGXQ8TBF5 258 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZCCHC10Q8TBK6 192 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 APH1BQ8WW43 257 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 GHSRQ92847 366 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 RBPMSQ93062 196 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 RAB3CQ96E17 227 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 CMTM7Q96FZ5 175 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PGAM5Q96HS1 289 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NARS2Q96I59 477 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 KAZALD1Q96I82 304 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ST6GAL2Q96JF0 529 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 LMLNQ96KR4 655 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PRMT6Q96LA8 375 aaPredicted RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZNF347Q96SE7 839 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 SCNM1Q9BWG6 230 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NUAK2Q9H093 628 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 FKRPQ9H9S5 495 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 EML4Q9HC35 981 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 HMG20AQ9NP66 347 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 RAB18Q9NP72 206 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PLSCR3Q9NRY6 295 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 GKN1Q9NS71 199 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NECAP2Q9NVZ3 263 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PLEKHJ1Q9NW61 149 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 HAO2Q9NYQ3 351 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 TMEM216Q9P0N5 145 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 STEAP1Q9UHE8 339 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 NXT1Q9UKK6 140 aaKnown RBP2.59□□□□□ -1.99
PMS1-209ENST00000424059 RNF150Q9ULK6 438 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 BAIAP2Q9UQB8 552 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 PRSS21Q9Y6M0 314 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 COLEC10Q9Y6Z7 277 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 USP47Q96K76 1375 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 MBD5Q9P267 1494 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 MLH3Q9UHC1 1453 aa2.59□□□□□ -1.99
PMS1-209ENST00000424059 IGLV5-39A0A0G2JS06 123 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms