RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 HPF1Q9NWY4 346 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MALT1Q9UDY8 824 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 BCAP29Q9UHQ4 241 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 BAIAP2L1Q9UHR4 511 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ERVK-11Q9UQG0 969 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CSAG2Q9Y5P2 127 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 COL6A6A6NMZ7 2263 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 UQCRHLA0A096LP55 91 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 A0A1W2PRB8 838 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ASPDHA6ND91 283 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TCP11X1B4DZS4 312 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SDHDO14521 159 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TP53I11O14683 189 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SCAMP2O15127 329 aaKnown RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TO15178 435 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ACOX3O15254 700 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SEC14L5O43304 696 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 NME2P1O60361 137 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SLC25A12O75746 678 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TGDSO95455 350 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 NADKO95544 446 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 F10P00742 488 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 P04436 131 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 G6PDP11413 515 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 FCGR1AP12314 374 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 AGAP20933 346 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 GPX3P22352 226 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 MYF6P23409 242 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CHATP28329 748 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 HPCAL1P37235 193 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SOX3P41225 446 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 FRKP42685 505 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TMED10P49755 219 aaKnown RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 EMDP50402 254 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 NR0B1P51843 470 aaKnown RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 NCBP2P52298 156 aaKnown RBP eCLIP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 MYBPHQ13203 477 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 KEAP1Q14145 624 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 IGFBP7Q16270 282 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TRMT12Q53H54 448 aaKnown RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 HSP90B2PQ58FF3 399 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 PAPPA-AS1Q5QFB9 102 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CPTPQ5TA50 214 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ZCCHC12Q6PEW1 402 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 B3GNT6Q6ZMB0 384 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 C16orf47Q6ZP98 133 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 RGS9BPQ6ZS82 235 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SHFQ7M4L6 423 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 NUP54Q7Z3B4 507 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 GALNTL5Q7Z4T8 443 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CAMKMTQ7Z624 323 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 RIMKLAQ8IXN7 391 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CYP4Z2PQ8N1L4 340 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OR2L13Q8N349 312 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CLIP4Q8N3C7 705 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OR52R1Q8NGF1 315 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OR9A2Q8NGT5 310 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 LRRC8CQ8TDW0 803 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 GRHL3Q8TE85 626 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 DOK4Q8TEW6 326 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 PAQR8Q8TEZ7 354 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 DYDC1Q8WWB3 177 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CKAP2Q8WWK9 683 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OR5P2Q8WZ92 322 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SGCDQ92629 289 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SPACA9Q96E40 222 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 AMDHD1Q96NU7 426 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SIGLEC12Q96PQ1 595 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TAAR6Q96RI8 345 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 GAL3ST4Q96RP7 486 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 FAM173AQ9BQD7 235 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SLC25A33Q9BSK2 321 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 GLIPR2Q9H4G4 154 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 LIN28AQ9H9Z2 209 aaKnown RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 C3orf14Q9HBI5 128 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 KLHL1Q9NR64 748 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OLAHQ9NV23 265 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TAS2R9Q9NYW1 312 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CNIH4Q9P003 139 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 GIMAP2Q9UG22 337 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 BPTFQ12830 3046 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 IGLV5-52A0A0A0MRZ9 124 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 PRSS51A0A1B0GVH4 220 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 CLEC18AA5D8T8 446 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 FRG2CA6NGY1 282 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 PTGES3LE9PB15 166 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 UPK1AO00322 258 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF195O14628 629 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ANKRD28O15084 1053 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 EMC8O43402 210 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF354AO60765 605 aaPredicted RBP2.24□□□□□ -2.05
VPS13A-208ENST00000423463 REM1O75628 298 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 TSPAN9O75954 239 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OR6B1O95007 311 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 SNX4O95219 450 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 LRATO95237 230 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 OR2C1O95371 312 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 PSMG1O95456 288 aa2.24□□□□□ -2.05
VPS13A-208ENST00000423463 ABCB1P08183 1280 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms