RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NAA11Q9BSU3 229 aaPredicted RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 SPATA9Q9BWV2 254 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 RSPO3Q9BXY4 272 aaPredicted RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 TMEM38AQ9H6F2 299 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 BCL2L10Q9HD36 194 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 ASB6Q9NWX5 421 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 MALT1Q9UDY8 824 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 SLC9A8Q9Y2E8 581 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 CIB4A0PJX0 185 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 CCT8L1PA6NM43 557 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SHISA9B4DS77 424 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 AKR7A3O95154 331 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 HEXAP06865 529 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 CDKN1AP38936 164 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 GZMMP51124 257 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 MAP2K6P52564 334 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 COPZ1P61923 177 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 HOXC5Q00444 222 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SPOCK1Q08629 439 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SCARB2Q14108 478 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SLC17A1Q14916 467 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 PGGHGQ32M88 737 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 KRTAP21-3Q3LHN1 58 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 OTUD3Q5T2D3 398 aaPredicted RBP13.36□□□□□ -0.27
USB1-202ENST00000423271 C9orf135Q5VTT2 229 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 PRAMEF8Q5VWM4 474 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 PRAMEF7Q5VXH5 474 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 PAQR6Q6TCH4 344 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 P2RY8Q86VZ1 359 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 CCDC197Q8NCU1 140 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SMAP2Q8WU79 429 aaPredicted RBP13.36□□□□□ -0.27
USB1-202ENST00000423271 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 BDH2Q9BUT1 245 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 PIF1Q9H611 641 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 EFCAB1Q9HAE3 211 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SLC7A10Q9NS82 523 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 TAS2R16Q9NYV7 291 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 SLC25A15Q9Y619 301 aa13.36□□□□□ -0.27
USB1-202ENST00000423271 AQP7P3A6NL99 342 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 TMEM229AB2RXF0 380 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 OVOL3O00110 214 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 PDLIM1O00151 329 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 ABCD4O14678 606 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 TMCC2O75069 709 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 GPIP06744 558 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 SLC6A2P23975 617 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 NUDT2P50583 147 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 CDH11P55287 796 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 RBBP4Q09028 425 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 GABRA6Q16445 453 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 ZNF311Q5JNZ3 666 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 TSPO2Q5TGU0 170 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 FAM91A1Q658Y4 838 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 REEP3Q6NUK4 255 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 COMTD1Q86VU5 262 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 CALHM3Q86XJ0 350 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 ZIC4Q8N9L1 334 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 C11orf65Q8NCR3 313 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 OR9K2Q8NGE7 335 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 ZNF385AQ96PM9 386 aaKnown RBP13.35□□□□□ -0.27
USB1-202ENST00000423271 SH3GL1Q99961 368 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 CACYBPQ9HB71 228 aaKnown RBP13.35□□□□□ -0.27
USB1-202ENST00000423271 ARL8BQ9NVJ2 186 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 ADPRHL2Q9NX46 363 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
USB1-202ENST00000423271 A8MVM7 634 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 NDUFAB1O14561 156 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 NPIPB7O75200 414 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 PTNP21246 168 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 AQP1P29972 269 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 ZNF83P51522 516 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 P2RY4P51582 365 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 C1orf140Q5VVS0 124 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 C8orf82Q6P1X6 216 aaPredicted RBP13.34□□□□□ -0.27
USB1-202ENST00000423271 HACD2Q6Y1H2 254 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 GPAT4Q86UL3 456 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 FITM2Q8N6M3 262 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 HIPK4Q8NE63 616 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 BCAS4Q8TDM0 211 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 TMEM45BQ96B21 275 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 ZNF583Q96ND8 569 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 MUS81Q96NY9 551 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 ECSITQ9BQ95 431 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 CMTM6Q9NX76 183 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
USB1-202ENST00000423271 UPB1Q9UBR1 384 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 ANGPT4Q9Y264 503 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 IFT52Q9Y366 437 aa13.34□□□□□ -0.27
USB1-202ENST00000423271 HIVEP2P31629 2446 aa13.33□□□□□ -0.27
USB1-202ENST00000423271 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 CD8AP01732 235 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 ETS2P15036 469 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 PCGF2P35227 344 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 ZSWIM7Q19AV6 140 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 VMACQ2NL98 169 aa13.33□□□□□ -0.28
USB1-202ENST00000423271 KRT73Q86Y46 540 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms