RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-204	ENST00000420717	FREM1	Q5H8C1	2179 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	GMNN	O75496	209 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	AKR7A3	O95154	331 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	GOSR1	O95249	250 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	COX6B1	P14854	86 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	PSMB1	P20618	241 aa	Known RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	TAS2R41	P59536	307 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	LTB	Q06643	244 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	BNIP1	Q12981	228 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	PIN1	Q13526	163 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	IQCC	Q4KMZ1	466 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	DNAL1	Q4LDG9	190 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	MEX3B	Q6ZN04	569 aa	Known RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	BEND4	Q6ZU67	534 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	NUFIP2	Q7Z417	695 aa	Known RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	LUZP2	Q86TE4	346 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	CCDC103	Q8IW40	242 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZNF610	Q8N9Z0	462 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	OR9K2	Q8NGE7	335 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	LIPH	Q8WWY8	451 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	POP5	Q969H6	163 aa	Known RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	C14orf79	Q96F83	325 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	C7orf34	Q96L11	122 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	NSMCE2	Q96MF7	247 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	FKRP	Q9H9S5	495 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	MEPE	Q9NQ76	525 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	MRPL39	Q9NYK5	338 aa	Known RBP	12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	B3GAT1	Q9P2W7	334 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	MALT1	Q9UDY8	824 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	ENPP4	Q9Y6X5	453 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	APC	P25054	2843 aa		12.8	□□□□□ -0.36
PTPN18-204	ENST00000420717	FFAR1	O14842	300 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	TSPAN19	P0C672	248 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	TCN1	P20061	433 aa	Predicted RBP	12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	COX5A	P20674	150 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	GRPR	P30550	384 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	UQCRC1	P31930	480 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	ST3GAL3	Q11203	375 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	TRIM25	Q14258	630 aa	Known RBP	12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	P2RY6	Q15077	328 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZNF74	Q16587	644 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZNF787	Q6DD87	383 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	TTC33	Q6PID6	262 aa	Predicted RBP	12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717		Q6ZT83	130 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	FAM86B1	Q8N7N1	296 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZIC4	Q8N9L1	334 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	ASB9	Q96DX5	294 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	DHRS1	Q96LJ7	313 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	HS6ST2	Q96MM7	605 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	MOGAT1	Q96PD6	335 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	KLHL4	Q9C0H6	718 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	NDUFAF4	Q9P032	175 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZNF229	Q9UJW7	825 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717	RCE1	Q9Y256	329 aa		12.79	□□□□□ -0.36
PTPN18-204	ENST00000420717		M0R082	166 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	MT-ND1	P03886	318 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	ASAH2B	P0C7U1	165 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	ATP6V1B2	P21281	511 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	GTF2E2	P29084	291 aa	Known RBP	12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	IFNA8	P32881	189 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	NTF4	P34130	210 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	UGT2B10	P36537	528 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	MAGEA2	P43356	314 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	UGT2B15	P54855	530 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	HIST2H2BC	Q6DN03	193 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	PGM2L1	Q6PCE3	622 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	NHLRC1	Q6VVB1	395 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	H1FNT	Q75WM6	255 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	SLC46A3	Q7Z3Q1	461 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	P3H2	Q8IVL5	708 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	NKAIN4	Q8IVV8	208 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	PIK3C3	Q8NEB9	887 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZNF417	Q8TAU3	575 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	FAM222B	Q8WU58	562 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	TMEM255B	Q8WV15	326 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	TMEM239	Q8WW34	195 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	MARVELD3	Q96A59	401 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	DNAJA3	Q96EY1	480 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	PYURF	Q96I23	114 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	PARPBP	Q9NWS1	579 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	NOSIP	Q9Y314	301 aa	Known RBP	12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	TESMIN	Q9Y4I5	508 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	ABCA12	Q86UK0	2595 aa		12.78	□□□□□ -0.36
PTPN18-204	ENST00000420717	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.77	□□□□□ -0.36
PTPN18-204	ENST00000420717		A0A1W2PRQ8	180 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	TCRBV5S2	A0A599	114 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	FAM221A	A4D161	298 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	PDLIM1	O00151	329 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	TRAF3IP2	O43734	574 aa	Predicted RBP	12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	POU2F1	P14859	743 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	PPP3CB	P16298	524 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	ITGA2	P17301	1181 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	RHCE	P18577	417 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	EDNRA	P25101	427 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	VLDLR	P98155	873 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	DGCR6	Q14129	220 aa		12.77	□□□□□ -0.37
PTPN18-204	ENST00000420717	TRAM2	Q15035	370 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms