RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SFTPDP35247 375 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 PGM1P36871 562 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 PEX19P40855 299 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SLC6A8P48029 635 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CPA2P48052 419 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 KRTAP10-9P60411 292 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 EEF1A1P68104 462 aaKnown RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SIRPAP78324 504 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 TXNL4AP83876 142 aaKnown RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SORDQ00796 357 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SELENBP1Q13228 472 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CBFBQ13951 182 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 FGFBP1Q14512 234 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 ICAM4Q14773 271 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 GUSBP1Q15486 140 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 MAPK11Q15759 364 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SYPL1Q16563 259 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SGCBQ16585 318 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SLC25A53Q5H9E4 307 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 C6orf10Q5SRN2 563 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 EEF1A1P5Q5VTE0 462 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 VWA1Q6PCB0 445 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SLC2A7Q6PXP3 512 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 Q6ZRM9 215 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 Q6ZSN1 163 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 EIF3MQ7L2H7 374 aaKnown RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 LUZP2Q86TE4 346 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 FUNDC1Q8IVP5 155 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CNEP1R1Q8N9A8 125 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 OR5W2Q8NH69 310 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 OR2V1Q8NHB1 315 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 GPR119Q8TDV5 335 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 GTF2H4Q92759 462 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 THOC1Q96FV9 657 aaKnown RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 AURKBQ96GD4 344 aaPredicted RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 KLHL15Q96M94 604 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF559Q9BR84 538 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 THUMPD3Q9BV44 507 aaKnown RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 LAT2Q9GZY6 243 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 TPT1P8Q9HAU6 139 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 MCCC2Q9HCC0 563 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 RLIMQ9NVW2 624 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 PAQR5Q9NXK6 330 aaPredicted RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 MCTS1Q9ULC4 181 aaKnown RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 LIPT1Q9Y234 373 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SLC35A3Q9Y2D2 325 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SNX13Q9Y5W8 968 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SPG11Q96JI7 2443 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 HEATR5AQ86XA9 2040 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 A0A096LPI6 279 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 TUBAL3A6NHL2 446 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 AGAP5A6NIR3 686 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 CLDN24A6NM45 220 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 GJE1A6NN92 205 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 EDF1O60869 148 aaKnown RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SS18L1O75177 396 aaPredicted RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 TFPTP0C1Z6 253 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 NR2F1P10589 423 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 ETFAP13804 333 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 HOXA5P20719 270 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 CAPN3P20807 821 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 RPS4Y1P22090 263 aaKnown RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 CPOXP36551 454 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 CRATP43155 626 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 MAGEA8P43361 318 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 ATP4BP51164 291 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 ARFIP2P53365 341 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 DSTNP60981 165 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 IRX1P78414 480 aaPredicted RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SQLEQ14534 574 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 PDSS1Q5T2R2 415 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 HBMQ6B0K9 141 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 LRRC74BQ6ZQY2 392 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM200AQ86VY9 491 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 FAM222BQ8WU58 562 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 ST8SIA1Q92185 356 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 ZG16BQ96DA0 208 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 STARD4Q96DR4 205 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SPDL1Q96EA4 605 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 MNTQ99583 582 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 RBM24Q9BX46 236 aaKnown RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SRXN1Q9BYN0 137 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 PRRG4Q9BZD6 226 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 PAIP1Q9H074 479 aaKnown RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SLC38A1Q9H2H9 487 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 COQ10BQ9H8M1 238 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SLC52A3Q9NQ40 469 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 EXOSC3Q9NQT5 275 aaKnown RBP6.17□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM45AQ9NWC5 275 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 SLC25A37Q9NYZ2 338 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 CCDC167Q9P0B6 97 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 P2RX2Q9UBL9 471 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 DSPPQ9NZW4 1301 aa6.17□□□□□ -1.42
HMGN1-205ENST00000419378 A0A0G2JND7 137 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 A8MXE2 369 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 AP3D1O14617 1153 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 SYNGR4O95473 234 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 PLGP00747 810 aaPredicted RBP6.16□□□□□ -1.42
HMGN1-205ENST00000419378 CGAP01215 116 aa6.16□□□□□ -1.42
HMGN1-205ENST00000419378 BCHEP06276 602 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms