RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 EVPLLA8MZ36 301 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 E7EQL1 145 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 RNF223E7ERA6 249 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 M0R1B8 84 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 WNT11O96014 354 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 PAX7P23759 505 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 PRKAR1BP31321 381 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 ACVR1BP36896 505 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 PRPS1P60891 318 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 CDK6Q00534 326 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 REEP3Q6NUK4 255 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 GPAT4Q86UL3 456 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 LSRQ86X29 649 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-208ENST00000417285 FBXL14Q8N1E6 418 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 FKRPQ9H9S5 495 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 CBLN4Q9NTU7 201 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 ADPRHL2Q9NX46 363 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 TRIM33Q9UPN9 1127 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 RASD1Q9Y272 281 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 B3GALT5Q9Y2C3 310 aa22.22■■□□□ 1.15
VEGFA-208ENST00000417285 TRBV5-3A0A0A0MS03 114 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 FRS3O43559 492 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 NPIPB7O75200 414 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 C9orf135Q5VTT2 229 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 ZNF544Q6NX49 715 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 DNM1P46Q6ZS02 220 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 MFSD8Q8NHS3 518 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 THOC1Q96FV9 657 aaKnown RBP22.21■■□□□ 1.15
VEGFA-208ENST00000417285 ZNF385AQ96PM9 386 aaKnown RBP22.21■■□□□ 1.15
VEGFA-208ENST00000417285 C1QTNF6Q9BXI9 259 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 TMEM38AQ9H6F2 299 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 RPS6KB2Q9UBS0 482 aa22.21■■□□□ 1.15
VEGFA-208ENST00000417285 LEF1Q9UJU2 399 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-208ENST00000417285 TMEM229AB2RXF0 380 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 INAFM1C9JVW0 142 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 KRT33AO76009 404 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 BMP4P12644 408 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 SLC6A2P23975 617 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 FABP6P51161 128 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 KLHL24Q6TFL4 600 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 CREB3L2Q70SY1 520 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 MUC15Q8N387 334 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 SIKE1Q9BRV8 207 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 OBP2BQ9NPH6 170 aa22.2■■□□□ 1.14
VEGFA-208ENST00000417285 AHSA1O95433 338 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 GPX2P18283 190 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 P2RY4P51582 365 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 HOXC5Q00444 222 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 SCARB2Q14108 478 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 DHRS4L2Q6PKH6 230 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 C10orf111Q8N326 155 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 ZNF607Q96SK3 696 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 RHNO1Q9BSD3 238 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 C12orf10Q9HB07 376 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 NPHS2Q9NP85 383 aa22.19■■□□□ 1.14
VEGFA-208ENST00000417285 PRORSD1PA6NEY8 169 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 ELOA3DA6NLF2 546 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-208ENST00000417285 EDF1O60869 148 aaKnown RBP22.18■■□□□ 1.14
VEGFA-208ENST00000417285 NDUFS7O75251 213 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 TP53P04637 393 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-208ENST00000417285 DSCR9P59020 149 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 ELOA3BQ3SY89 546 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 BHLHE22Q8NFJ8 381 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-208ENST00000417285 ELOA3Q8NG57 546 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 IKZF5Q9H5V7 419 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 GDF2Q9UK05 429 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-208ENST00000417285 NDUFAF1Q9Y375 327 aa22.18■■□□□ 1.14
VEGFA-208ENST00000417285 ATRQ13535 2644 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 ANGPT2O15123 496 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 GTF2E2P29084 291 aaKnown RBP22.17■■□□□ 1.14
VEGFA-208ENST00000417285 CHRNB3Q05901 458 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 RAB35Q15286 201 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 RUNDC3AQ59EK9 446 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 C11orf71Q6IPW1 123 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 C5orf46Q6UWT4 87 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 C6orf89Q6UWU4 347 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 DLEU7Q6UYE1 221 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 DHDDSQ86SQ9 333 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 LSMEM1Q8N8F7 131 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 HIPK4Q8NE63 616 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 ZNF317Q96PQ6 595 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-208ENST00000417285 CPPED1Q9BRF8 314 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-208ENST00000417285 CACNG6Q9BXT2 260 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 SLC13A4Q9UKG4 626 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 ANGPT4Q9Y264 503 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 ATP23Q9Y6H3 246 aa22.17■■□□□ 1.14
VEGFA-208ENST00000417285 SONP18583 2426 aaKnown RBP22.17■■□□□ 1.14
VEGFA-208ENST00000417285 ALPK2Q86TB3 2170 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 ZNF587BE7ETH6 402 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 OR2T1O43869 369 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 SSX4O60224 188 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 SERPINB7O75635 380 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 CDH2P19022 906 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-208ENST00000417285 PTNP21246 168 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 APOBEC3AP31941 199 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-208ENST00000417285 NUDT6P53370 316 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 NCALDP61601 193 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 DMTNQ08495 405 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 SPOCK1Q08629 439 aa22.16■■□□□ 1.14
VEGFA-208ENST00000417285 NET1Q7Z628 596 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms