RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PCMT1P22061 227 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 IDH3GP51553 393 aaPredicted RBP8.3□□□□□ -1.08
RFFL-203ENST00000413582 PRPS1P60891 318 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 TGFBR3Q03167 851 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 LRRC74AQ0VAA2 488 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 TP53BP2Q13625 1128 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 CCNIQ14094 377 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 TRIP10Q15642 601 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 AGKQ53H12 422 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 PRR31Q5SQ13 230 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
RFFL-203ENST00000413582 TSPO2Q5TGU0 170 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 BLOC1S3Q6QNY0 202 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 KLHL24Q6TFL4 600 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 R3HCC1LQ7Z5L2 792 aaKnown RBP8.3□□□□□ -1.08
RFFL-203ENST00000413582 LSRQ86X29 649 aaPredicted RBP8.3□□□□□ -1.08
RFFL-203ENST00000413582 TREML1Q86YW5 311 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 CCDC103Q8IW40 242 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 RIMKLAQ8IXN7 391 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 ADAMTS15Q8TE58 950 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 FAM216AQ8WUB2 273 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 TMEM234Q8WY98 164 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 DNAJA3Q96EY1 480 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 SLC38A2Q96QD8 506 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 PRPF18Q99633 342 aaKnown RBP8.3□□□□□ -1.08
RFFL-203ENST00000413582 KATNB1Q9BVA0 655 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 ACTRT3Q9BYD9 372 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 LAT2Q9GZY6 243 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 SERINC1Q9NRX5 453 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 GPATCH2Q9NW75 528 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 NDE1Q9NXR1 346 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 ARMCX1Q9P291 453 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 CHRNA9Q9UGM1 479 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 ATP6V1HQ9UI12 483 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 KCNE5Q9UJ90 142 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 SLC9A8Q9Y2E8 581 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 NDUFAF1Q9Y375 327 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 FLVCR1Q9Y5Y0 555 aa8.3□□□□□ -1.08
RFFL-203ENST00000413582 CFLARO15519 480 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 CYP7B1O75881 506 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 RGS9O75916 674 aaPredicted RBP8.29□□□□□ -1.08
RFFL-203ENST00000413582 WNT11O96014 354 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 KRT16P08779 473 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 OR4A8P0C604 315 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 T-ENOLP0DO92 83 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 MPGP29372 298 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 HPCAL1P37235 193 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 MAGEA8P43361 318 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 POLR2JP52435 117 aaKnown RBP8.29□□□□□ -1.08
RFFL-203ENST00000413582 HILS1P60008 231 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 UFM1P61960 85 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 H3F3AP84243 136 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 LGALS3BPQ08380 585 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 RIN1Q13671 783 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 ZNF141Q15928 474 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 HIKESHIQ53FT3 197 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 PDLIM3Q53GG5 364 aaPredicted RBP8.29□□□□□ -1.08
RFFL-203ENST00000413582 FUNDC1Q8IVP5 155 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 ZNF786Q8N393 782 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 KRTCAP2Q8N6L1 136 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 FAM71CQ8NEG0 241 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 OR7A2PQ8NGA2 310 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 OR8J2Q8NGG1 315 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 OR56A1Q8NGH5 318 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 PSMA8Q8TAA3 256 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 GCDHQ92947 438 aaPredicted RBP8.29□□□□□ -1.08
RFFL-203ENST00000413582 BOD1Q96IK1 185 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 SDF2Q99470 211 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 OR11A1Q9GZK7 315 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 SAP130Q9H0E3 1048 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 RAB1BQ9H0U4 201 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 EFCAB1Q9HAE3 211 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 CTPS2Q9NRF8 586 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 ARL8BQ9NVJ2 186 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 CCDC167Q9P0B6 97 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 UPB1Q9UBR1 384 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 FAF1Q9UNN5 650 aaPredicted RBP8.29□□□□□ -1.08
RFFL-203ENST00000413582 HDGFL3Q9Y3E1 203 aa8.29□□□□□ -1.08
RFFL-203ENST00000413582 SPIN1Q9Y657 262 aaPredicted RBP8.29□□□□□ -1.08
RFFL-203ENST00000413582 CCDC154A6NI56 674 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 B4DSR2 109 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 BCAS1O75363 584 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 CSTAP01040 98 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 CRYAAP02489 173 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 IGFBP1P08833 259 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 UBTFL6P0CB48 400 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 APOBEC1P41238 236 aaKnown RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 CCT3P49368 545 aaKnown RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 KHKP50053 298 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 NAAAQ02083 359 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 SLC17A1Q14916 467 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 VHLLQ6RSH7 139 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 UGT2A3Q6UWM9 527 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 HACD2Q6Y1H2 254 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 ZNF771Q7L3S4 317 aaPredicted RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 GLCCI1Q86VQ1 547 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 ZCCHC24Q8N2G6 241 aaKnown RBP8.28□□□□□ -1.08
RFFL-203ENST00000413582 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 VPS37AQ8NEZ2 397 aa8.28□□□□□ -1.08
RFFL-203ENST00000413582 OR5D16Q8NGK9 328 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms