RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ABLIM2Q6H8Q1 611 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 OR2A2Q6IF42 318 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 MTFR2Q6P444 385 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 KDM8Q8N371 416 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 OR6S1Q8NH40 331 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 ALPK1Q96QP1 1244 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 PSD2Q9BQI7 771 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 U3KQV3 271 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 AQP7P3A6NL99 342 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 FZD7O75084 574 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 PLGP00747 810 aaPredicted RBP27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 LIX1LQ8IVB5 337 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 MCEMP1Q8IX19 187 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 SLC43A2Q8N370 569 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 SDCCAG3Q96C92 435 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 BPIFA2Q96DR5 249 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 SGTBQ96EQ0 304 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 NANSQ9NR45 359 aa27.26■■□□□ 1.95
CSNK1E-206ENST00000413574 SH3PXD2BA1X283 911 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 HSPB2A8KAH6 182 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 TNFRSF11BO00300 401 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 LDLRP01130 860 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 MAKP20794 623 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 LIMS1P48059 325 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 SIRPAP78324 504 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 PRKCDQ05655 676 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 CDSNQ15517 529 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 HSPB2Q16082 182 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 RRM2BQ7LG56 351 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 TUSC5Q8IXB3 177 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 RNF113BQ8IZP6 322 aaKnown RBP27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 CNEP1R1Q8N9A8 125 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 OR4K5Q8NGD3 323 aa27.25■■□□□ 1.95
CSNK1E-206ENST00000413574 ZNF716A6NP11 495 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 MT-ATP6P00846 226 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 LAPTM4AQ15012 233 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 RNPS1Q15287 305 aaKnown RBP27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 MAMDC2Q7Z304 686 aaPredicted RBP27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 GPAT4Q86UL3 456 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 OR4C15Q8NGM1 316 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 PYDC1Q8WXC3 89 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 DUS3LQ96G46 650 aaKnown RBP27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 GMPPAQ96IJ6 420 aaPredicted RBP27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 FKRPQ9H9S5 495 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 CHST11Q9NPF2 352 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 AP4S1Q9Y587 144 aa27.24■■□□□ 1.95
CSNK1E-206ENST00000413574 FASNP49327 2511 aaKnown RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 A0A1W2PNV4 684 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 KRT36O76013 467 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 OR7A10O76100 309 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 CTSSP25774 331 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 KIR2DL2P43627 348 aaPredicted RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 GPR4P46093 362 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 IST1P53990 364 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 CTBP2P56545 445 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 MFSD13AQ14CX5 517 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 GUSBP1Q15486 140 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 GTF2IRD2BQ6EKJ0 949 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 TMEM225Q6GV28 225 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 H1FNTQ75WM6 255 aaPredicted RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 MRGPRGQ86SM5 289 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 GTF2IRD2Q86UP8 949 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 PIGXQ8TBF5 258 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 ZFP3Q96NJ6 502 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 ASPNQ9BXN1 380 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 YY1AP1Q9H869 796 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 REEP1Q9H902 201 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 KLHL9Q9P2J3 617 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 SAMHD1Q9Y3Z3 626 aaKnown RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 TNFSF13O75888 250 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 ASAH2BP0C7U1 165 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 HOXB6P17509 224 aaKnown RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 BMP5P22003 454 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 HMGA2P52926 109 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 PMS2P3Q13401 168 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 VWA1Q6PCB0 445 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 ITLN2Q8WWU7 325 aaPredicted RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 FAM46AQ96IP4 442 aaKnown RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 MRPL39Q9NYK5 338 aaKnown RBP27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 COQ3Q9NZJ6 369 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 ZNF229Q9UJW7 825 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 TMCC3Q9ULS5 477 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 CORINQ9Y5Q5 1042 aa27.23■■□□□ 1.95
CSNK1E-206ENST00000413574 SS18L1O75177 396 aaPredicted RBP27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 ENTPD5O75356 428 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 IGF2P01344 180 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 SMSP52788 366 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 SLC17A1Q14916 467 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 FAM26EQ8N5C1 309 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 OR5J2Q8NH18 312 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 ARMC1Q9NVT9 282 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 B3GALT5Q9Y2C3 310 aa27.22■■□□□ 1.95
CSNK1E-206ENST00000413574 CLEC18AA5D8T8 446 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 MS4A18H0YCH9 400 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 GNGT2O14610 69 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 HPRP00739 348 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 AGTR1P30556 359 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 MS4A18Q3C1V0 323 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 CLEC18BQ6UXF7 455 aa27.21■■□□□ 1.95
CSNK1E-206ENST00000413574 FAM214BQ7L5A3 538 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms