RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 ALG10BQ5I7T1 473 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 AAED1Q7RTV5 226 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 CALHM3Q86XJ0 350 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF611Q8N823 705 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 SLC38A4Q969I6 547 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 MUS81Q96NY9 551 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF317Q96PQ6 595 aaPredicted RBP16.75■□□□□ 0.27
SF3A1-202ENST00000411423 AMBRA1Q9C0C7 1298 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 TAS2R16Q9NYV7 291 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 KLHL14Q9P2G3 628 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 B3GAT1Q9P2W7 334 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 RPS6KB2Q9UBS0 482 aa16.75■□□□□ 0.27
SF3A1-202ENST00000411423 CIB4A0PJX0 185 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 CCT8L1PA6NM43 557 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 SHISA9B4DS77 424 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 SMPD2O60906 423 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 SERPINB7O75635 380 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 LYPD3O95274 346 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 LGI1O95970 557 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 CD3EP07766 207 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 PCGF2P35227 344 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 CDH12P55289 794 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 SPOCK1Q08629 439 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 TMEM225Q6GV28 225 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 ADAM5Q6NVV9 412 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 WDR88Q6ZMY6 472 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 SNX32Q86XE0 403 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 OR6T1Q8NGN1 323 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 PIGTQ969N2 578 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 LRRC58Q96CX6 371 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 PERPQ96FX8 193 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 USB1Q9BQ65 265 aaKnown RBP16.74■□□□□ 0.27
SF3A1-202ENST00000411423 TRIM2Q9C040 744 aa16.74■□□□□ 0.27
SF3A1-202ENST00000411423 GSX1Q9H4S2 264 aaPredicted RBP16.74■□□□□ 0.27
SF3A1-202ENST00000411423 A0A087WUJ7 227 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 LOC100653049A0A140TA62 436 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 LRRN3E7EW58 273 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 M0R082 166 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 MRASO14807 208 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 KRT34O76011 436 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 SOD3P08294 240 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 MDH1P40925 334 aaKnown RBP16.73■□□□□ 0.27
SF3A1-202ENST00000411423 VMACQ2NL98 169 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF672Q499Z4 452 aaPredicted RBP16.73■□□□□ 0.27
SF3A1-202ENST00000411423 Q5PR19 223 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 ULK3Q6PHR2 472 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 WDFY1Q8IWB7 410 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 LRRC75A-AS1Q8N1F1 130 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF417Q8TAU3 575 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 DNAJA4Q8WW22 397 aaPredicted RBP16.73■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF587Q96SQ5 575 aaPredicted RBP16.73■□□□□ 0.27
SF3A1-202ENST00000411423 MCHR1Q99705 422 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 C1QTNF6Q9BXI9 259 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 SLCO5A1Q9H2Y9 848 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 ESRP2Q9H6T0 727 aaKnown RBP16.73■□□□□ 0.27
SF3A1-202ENST00000411423 PARPBPQ9NWS1 579 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 ARMCX1Q9P291 453 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 GMPR2Q9P2T1 348 aaKnown RBP16.73■□□□□ 0.27
SF3A1-202ENST00000411423 UPB1Q9UBR1 384 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 RASD1Q9Y272 281 aa16.73■□□□□ 0.27
SF3A1-202ENST00000411423 UPK3AO75631 287 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 BGLAPP02818 100 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 DANCRP0C864 163 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 GRPRP30550 384 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 PTH2RP49190 550 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF83P51522 516 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 FAM91A1Q658Y4 838 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 LINC00114Q6XXX2 140 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 P2RY8Q86VZ1 359 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 CIARTQ8N365 385 aaPredicted RBP16.72■□□□□ 0.27
SF3A1-202ENST00000411423 VANGL1Q8TAA9 524 aaPredicted RBP16.72■□□□□ 0.27
SF3A1-202ENST00000411423 SLC47A1Q96FL8 570 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF583Q96ND8 569 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 MOGAT1Q96PD6 335 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 SMR3AQ99954 134 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 SLC17A5Q9NRA2 495 aa16.72■□□□□ 0.27
SF3A1-202ENST00000411423 ACANP16112 2415 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 TRAV36DV7A0A075B6V5 113 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 MS4A18H0YCH9 400 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 ABCD4O14678 606 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 ZNF432O94892 652 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 HPRP00739 348 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 HLA-DOBP13765 273 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 MPGP29372 298 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 NCALDP61601 193 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 PGGHGQ32M88 737 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 MS4A18Q3C1V0 323 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 COQ5Q5HYK3 327 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 FAM69AQ5T7M9 428 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 NIPAL3Q6P499 406 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 CCDC80Q76M96 950 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 POU5F2Q8N7G0 328 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 BHLHE22Q8NFJ8 381 aaPredicted RBP16.71■□□□□ 0.27
SF3A1-202ENST00000411423 OR8J3Q8NGG0 315 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 RNF217Q8TC41 542 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 MUCL1Q96DR8 90 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 ALKBH3Q96Q83 286 aaPredicted RBP16.71■□□□□ 0.27
SF3A1-202ENST00000411423 GSX2Q9BZM3 304 aa16.71■□□□□ 0.27
SF3A1-202ENST00000411423 TMEM27Q9HBJ8 222 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms