RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 SMAD5Q99717 465 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-202ENST00000409478 GPR62Q9BZJ7 368 aa5.38□□□□□ -1.55
R3HDM1-202ENST00000409478 ADGRL4Q9HBW9 690 aa5.38□□□□□ -1.55
R3HDM1-202ENST00000409478 MRPS30Q9NP92 439 aaKnown RBP5.38□□□□□ -1.55
R3HDM1-202ENST00000409478 MYOZ1Q9NP98 299 aaPredicted RBP5.38□□□□□ -1.55
R3HDM1-202ENST00000409478 KLHL28Q9NXS3 571 aa5.38□□□□□ -1.55
R3HDM1-202ENST00000409478 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 C17orf102A2RUQ5 167 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 UNC119BA6NIH7 251 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 F8VVB4 439 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 F8VWA3 439 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PPM1DO15297 605 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 B4GALT2O60909 372 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC16A8O95907 504 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 GLP1RP43220 463 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CD81P60033 236 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SIRPAP78324 504 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 HTRA3P83110 453 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CHAF1BQ13112 559 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 AIMP2Q13155 320 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 RPE65Q16518 533 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PNLIPRP3Q17RR3 467 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 DNLZQ5SXM8 178 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 IER5LQ5T953 404 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TPRG1Q6ZUI0 275 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 GPRC5AQ8NFJ5 357 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 AUTS2Q8WXX7 1259 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TMEM159Q96B96 161 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PLD4Q96BZ4 506 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 MALSU1Q96EH3 234 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ELF4Q99607 663 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SSX3Q99909 188 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC25A21Q9BQT8 299 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 RIOK2Q9BVS4 552 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TRMT61BQ9BVS5 477 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SLITRK2Q9H156 845 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TSPAN10Q9H1Z9 355 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 OR52D1Q9H346 318 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 POFUT1Q9H488 388 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 MOKQ9UQ07 419 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ASF1AQ9Y294 204 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ZNF337Q9Y3M9 751 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TMEM189-UBE2V1I3L0A0 370 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SULT2B1O00204 365 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 EMC8O43402 210 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PPIHO43447 177 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 XRCC3O43542 346 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ITGB2P05107 769 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 MRPL3P09001 348 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SFTA3P0C7M3 94 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 NQO2P16083 231 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CPT2P23786 658 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ITGA3P26006 1051 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CAV2P51636 162 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 GAS6Q14393 721 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 OR52W1Q6IF63 320 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CRTC1Q6UUV9 634 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TAS1R1Q7RTX1 841 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SZRD1Q7Z422 152 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 REC114Q7Z4M0 266 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ANGPTL5Q86XS5 388 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 HS6ST3Q8IZP7 471 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 MMP21Q8N119 569 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 LNX2Q8N448 690 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 OR5AP2Q8NGF4 316 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 OR51S1Q8NGJ8 323 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PIK3IP1Q96FE7 263 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 C14orf144Q96I85 54 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 MED20Q9H944 212 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SFXN1Q9H9B4 322 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 KCNK12Q9HB15 430 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 RHOFQ9HBH0 211 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CMC2Q9NRP2 79 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 OR5V1Q9UGF6 321 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 IL20RAQ9UHF4 553 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 POMT1Q9Y6A1 747 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 KIAA0100Q14667 2235 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TRBV2A0A0J9YWF9 115 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 BHLHE40O14503 412 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PAPLNO95428 1278 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 VNN2O95498 520 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SNAI1O95863 264 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CD74P04233 296 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CHRM4P08173 479 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SLC2A1P11166 492 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 GABRR2P28476 465 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 CD34P28906 385 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 S100A2P29034 98 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 SERPINA4P29622 427 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 PSEN2P49810 448 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 F2RL1P55085 397 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 RPS11P62280 158 aaKnown RBP eCLIP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 TBPL1P62380 186 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ZNF239Q16600 458 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 FAM180BQ6P0A1 224 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 C16orf59Q7L2K0 433 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 BAP18Q8IXM2 172 aa5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 ZNF433Q8N7K0 673 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-202ENST00000409478 OR10H5Q8NGA6 315 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms