RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 COTL1Q14019 142 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 BCL2A1Q16548 175 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 DUSP7Q16829 419 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CARD16Q5EG05 197 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CCDC137Q6PK04 289 aaKnown RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 GPRIN3Q6ZVF9 776 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 BZW1Q7L1Q6 419 aaKnown RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 HIPK1Q86Z02 1210 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 LRRC34Q8IZ02 419 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 MCOLN2Q8IZK6 566 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CEP112Q8N8E3 955 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR4C5Q8NGB2 326 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR52H1Q8NGJ2 320 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 TSEN15Q8WW01 171 aaKnown RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 ELMO1Q92556 727 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 MCUR1Q96AQ8 359 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 RANBP9Q96S59 729 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CLCC1Q96S66 551 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CCT8L2Q96SF2 557 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 PSMB7Q99436 277 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CNN2Q99439 309 aaKnown RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 RNF2Q99496 336 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 SPACA1Q9HBV2 294 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 AGPAT3Q9NRZ7 376 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 CLEC5AQ9NY25 188 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF581Q9P0T4 197 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 HMGXB4Q9UGU5 601 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 NINLQ9Y2I6 1382 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 A0A0J9YWU9 116 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 LOC105371267A0A1B0GV96 52 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR5K4A6NMS3 321 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 HSD17B6O14756 317 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 HCN1O60741 890 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 CDH16O75309 829 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 SH3BGRLO75368 114 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 KLHL2O95198 593 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 CT62P0C5K7 136 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 RNH1P13489 461 aaKnown RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 IL2RGP31785 369 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 LONP1P36776 959 aaKnown RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 DDOSTP39656 456 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 RPL32P62910 135 aaKnown RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 GLYR1Q49A26 553 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 TWF2Q6IBS0 349 aaKnown RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 UTS2BQ765I0 119 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 GTSCR1Q86UQ5 136 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 COMTD1Q86VU5 262 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 MTURNQ8N3F0 131 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR56B4Q8NH76 319 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 FAM81AQ8TBF8 368 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 ZPLD1Q8TCW7 415 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 SETD7Q8WTS6 366 aaKnown RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 CXorf40BQ96DE9 158 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 C19orf60Q96EN9 201 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 SERAC1Q96JX3 654 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 OXGR1Q96P68 337 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 PANX2Q96RD6 677 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 TGS1Q96RS0 853 aaKnown RBP3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 MBOAT4Q96T53 435 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 MAPKAP1Q9BPZ7 522 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 CHIAQ9BZP6 476 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 HAUS4Q9H6D7 363 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 REEP4Q9H6H4 257 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 TMEM185BQ9H7F4 350 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 ANKRA2Q9H9E1 313 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 UCK1Q9HA47 277 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 CUTCQ9NTM9 273 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 BFARQ9NZS9 450 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 EMC3Q9P0I2 261 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 NCOA3Q9Y6Q9 1424 aa3.77□□□□□ -1.81
HMGB1P13-201ENST00000406019 TTC21AQ8NDW8 1320 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 TCRBV9S1A1TA0A576 114 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 CCDC182A6NF36 153 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 C9JVG2 144 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 GFYI3L273 518 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 WRBO00258 174 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 TRDMT1O14717 391 aaKnown RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 HAT1O14929 419 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 SULT1B1O43704 296 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 DFNA5O60443 496 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 LALBAP00709 142 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 IGHV3-13P01766 116 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 RETP07949 1114 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 NPR2P20594 1047 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 PRKACBP22694 351 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 OTX1P32242 354 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 BMI1P35226 326 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 KIR2DS2P43631 304 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 CDH6P55285 790 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 GPX6P59796 221 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 RPS15P62841 145 aaKnown RBP3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 XIAPP98170 497 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 ASPHQ12797 758 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 RUNX3Q13761 415 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 TGIF1Q15583 401 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 DGUOKQ16854 277 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 EIPR1Q53HC9 387 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 GPRC6AQ5T6X5 926 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 OR2G6Q5TZ20 316 aa3.76□□□□□ -1.81
HMGB1P13-201ENST00000406019 C8orf74Q6P047 294 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms