RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 H2AFY2Q9P0M6 372 aaPredicted RBP3.35□□□□□ -1.87
RTN4-208ENST00000404909 ERVK-18Q9QC07 812 aa3.35□□□□□ -1.87
RTN4-208ENST00000404909 ZNF229Q9UJW7 825 aa3.35□□□□□ -1.87
RTN4-208ENST00000404909 BOKQ9UMX3 212 aaPredicted RBP3.35□□□□□ -1.87
RTN4-208ENST00000404909 MSRB2Q9Y3D2 182 aa3.35□□□□□ -1.87
RTN4-208ENST00000404909 ACACBO00763 2458 aa3.35□□□□□ -1.87
RTN4-208ENST00000404909 OR2M5A3KFT3 312 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 LRRC3CA6NJW4 275 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SURF4O15260 269 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SEC14L5O43304 696 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR2T1O43869 369 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 NPIPB7O75200 414 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 AKR7A3O95154 331 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 BGLAPP02818 100 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CCDC159P0C7I6 412 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ASAH2BP0C7U1 165 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SHC1P29353 583 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 C21orf33P30042 268 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 ATP6V1E1P36543 226 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SNRPGP62308 76 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 MFAP5Q13361 173 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 KLHL12Q53G59 568 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 WIPI1Q5MNZ9 446 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 SLC25A25Q6KCM7 469 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CPOQ8IVL8 374 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 GTPBP8Q8N3Z3 284 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 LNX2Q8N448 690 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CLDN22Q8N7P3 220 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SDR9C7Q8NEX9 313 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ANKK1Q8NFD2 765 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR2M7Q8NG81 312 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR52E2Q8NGJ4 325 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 STK35Q8TDR2 534 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 RASD2Q96D21 266 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 Q96MT0 163 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SFXN2Q96NB2 322 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 FAM173AQ9BQD7 235 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 PIGQQ9BRB3 760 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 COPS4Q9BT78 406 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ASPNQ9BXN1 380 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 YTHDF1Q9BYJ9 559 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 MRPS26Q9BYN8 205 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR51V1Q9H2C8 321 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 FKRPQ9H9S5 495 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SNX5Q9Y5X3 404 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SPIN1Q9Y657 262 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 KCNMB2Q9Y691 235 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ATRXP46100 2492 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 NBASA2RRP1 2371 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 A0A087WZY1 265 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 TEX13CA0A0J9YWL9 993 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 DPPA5A6NC42 116 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CLCA1A8K7I4 914 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 H0YC42 278 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ZNF208O43345 1280 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 RGS10O43665 173 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 FADS2O95864 444 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 MT-ATP6P00846 226 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 GYPBP06028 91 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SP1P08047 785 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 HIST1H1CP16403 213 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 ZNF3P17036 446 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 IDUAP35475 653 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 MAGEA5P43359 124 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 STARP49675 285 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR2B6P58173 313 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CXCR4P61073 352 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 MVKQ03426 396 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 TLE3Q04726 772 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ST3GAL4Q11206 333 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 FOXO1Q12778 655 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SELENBP1Q13228 472 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CRMP1Q14194 572 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ZNF766Q5HY98 468 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 DPY19L2P2Q6ZN68 376 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 KCTD8Q6ZWB6 473 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CXXC5Q7LFL8 322 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 GPAT4Q86UL3 456 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SATL1Q86VE3 508 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SPACA3Q8IXA5 215 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 STX19Q8N4C7 294 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 FAM83FQ8NEG4 500 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR51L1Q8NGJ5 315 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR9Q1Q8NGQ5 310 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 OR5J2Q8NH18 312 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 GGHQ92820 318 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 Q96M85 177 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 ZNF582Q96NG8 517 aaPredicted RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 NMNAT3Q96T66 252 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 RERGLQ9H628 205 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 CCDC86Q9H6F5 360 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 HINT3Q9NQE9 182 aaKnown RBP3.34□□□□□ -1.87
RTN4-208ENST00000404909 GRHPRQ9UBQ7 328 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 B4GALT7Q9UBV7 327 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 WASF3Q9UPY6 502 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 HIF3AQ9Y2N7 669 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 SLC6A5Q9Y345 797 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 PCDHGB6Q9Y5F9 930 aa3.34□□□□□ -1.87
RTN4-208ENST00000404909 COMMD3-BMI1R4GMX3 469 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms