RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 E9PI62 339 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 BLOC1S5-TXNDC5H3BN57 136 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LRRTM2O43300 516 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 HCRTR2O43614 444 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ICOSLGO75144 302 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TRIM3O75382 744 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TFP02787 698 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GYPBP06028 91 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PRKAR1AP10644 381 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RBMS1P29558 406 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 P2RX1P51575 399 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NR0B1P51843 470 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CTXN1P60606 82 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ERVK-25P63136 954 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 E2F1Q01094 437 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EGR4Q05215 589 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CBX3Q13185 183 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 UNQ9370/PRO34162Q6UXP9 181 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NANOGNBQ7Z5D8 188 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 BPHLQ86WA6 291 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 Q8N9G6 341 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SCAIQ8N9R8 606 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 THAP4Q8WY91 577 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OMA1Q96E52 524 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ARSGQ96EG1 525 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LMF1Q96S06 567 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 KCNJ15Q99712 375 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ALG12Q9BV10 488 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MRI1Q9BV20 369 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RXFP3Q9NSD7 469 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NCDNQ9UBB6 729 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PPIEQ9UNP9 301 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TMEM14AQ9Y6G1 99 aa16.14■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SPAG17Q6Q759 2223 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PCDH15Q96QU1 1955 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GON4LQ3T8J9 2241 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PHYHO14832 338 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 UCHL1P09936 223 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NAGAP17050 411 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RAB3BP20337 219 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NPR2P20594 1047 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SHC1P29353 583 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 AQP2P41181 271 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TMED10P49755 219 aaKnown RBP16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ZNF117Q03924 483 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SELENBP1Q13228 472 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 IL18Q14116 193 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NR0B2Q15466 257 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 VWA2Q5GFL6 755 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 IDNKQ5T6J7 187 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LINC01590Q5TEZ4 76 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LYSMD4Q5XG99 296 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SFXN4Q6P4A7 337 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LEG1Q6P5S2 330 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 BAIAP2L2Q6UXY1 529 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MAMDC2Q7Z304 686 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EXD3Q8N9H8 876 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GATSQ8NAP1 163 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 DUSP18Q8NEJ0 188 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 LPAR4Q99677 370 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SEMA4CQ9C0C4 833 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 XIRP2A4UGR9 3374 aa16.13■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NOTOA8MTQ0 251 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OIP5O43482 229 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 RENP00797 406 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 AZGP1P25311 298 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 APEX1P27695 318 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ABCD3P28288 659 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CASP3P42574 277 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 GDI2P50395 445 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 POLR2HP52434 150 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TPTEP56180 551 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CAV3P56539 151 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SLC26A5P58743 744 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 ZP2Q05996 745 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SF3A2Q15428 464 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SHBQ15464 509 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OR5J2Q8NH18 312 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MOSPD2Q8NHP6 518 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 STK35Q8TDR2 534 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TMEM234Q8WY98 164 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 THRSPQ92748 146 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CCDC74AQ96AQ1 378 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SLC7A5P2Q9GIP4 190 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 KLHL1Q9NR64 748 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 HEATR5AQ86XA9 2040 aa16.12■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TRBV2A0A0J9YWF9 115 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 TEX13CA0A0J9YWL9 993 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FAM25AB3EWG3 89 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FAM25CB3EWG5 89 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FAM25GB3EWG6 89 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 PDCD5O14737 125 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 OR2T1O43869 369 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 FADS1O60427 444 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 SLC25A12O75746 678 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MST1P26927 711 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 EPHA8P29322 1005 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 CDKN2AP42771 156 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 NR4A2P43354 598 aa16.11■□□□□ 0.17
HLA-DQB1-204ENST00000399084 MAP2K6P52564 334 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms