RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 NEIL3Q8TAT5 605 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 FAM110BQ8TC76 370 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 FBXO32Q969P5 355 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 CXorf40BQ96DE9 158 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 NUS1Q96E22 293 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 TIMD4Q96H15 378 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 ITCHQ96J02 903 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 CNDP1Q96KN2 507 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 C12orf42Q96LP6 360 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 MAGEB18Q96M61 343 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 CNN2Q99439 309 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 P2RY13Q9BPV8 354 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 MRPL45Q9BRJ2 306 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 CHRDL1Q9BU40 450 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 PKIBQ9C010 78 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 RBKSQ9H477 322 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 RANBP3Q9H6Z4 567 aaPredicted RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 NMRAL1Q9HBL8 299 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 TM9SF3Q9HD45 589 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 NT5MQ9NPB1 228 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 ABCB10Q9NRK6 738 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 THUMPD1Q9NXG2 353 aaKnown RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 SEC14L3Q9UDX4 400 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 BTNL2Q9UIR0 455 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 NAP1L2Q9ULW6 460 aaPredicted RBP1.89□□□□□ -2.11
CD47-203ENST00000398258 STAP1Q9ULZ2 295 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 ABCG2Q9UNQ0 655 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 N6AMT1Q9Y5N5 214 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 CDH10Q9Y6N8 788 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 V9GY05 133 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 FANCIQ9NVI1 1328 aa1.89□□□□□ -2.11
CD47-203ENST00000398258 PLEKHG1Q9ULL1 1385 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 PLEKHH1Q9ULM0 1364 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 MEGF6O75095 1541 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 A0A0J9YXY3 114 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 IQANK1A0A1B0GTG1 560 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZNF716A6NP11 495 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 A8MXQ7 604 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 E9PBE3 544 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 GOLGA8SH3BPF8 625 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ABCD4O14678 606 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 UPK3AO75631 287 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 SERPINA3P01011 423 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZNF735P0CB33 412 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 RBMY1CP0DJD4 496 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 KITLGP21583 273 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 GABRR1P24046 479 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZBTB25P24278 435 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 CXCR2P25025 360 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 HMGB2P26583 209 aaKnown RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 CD1BP29016 333 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 GLP1RP43220 463 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 APOC4P55056 127 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 STX17P56962 302 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 NUP107P57740 925 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 CSNK1G2P78368 415 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 HMGN5P82970 282 aaKnown RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 SCRN3Q0VDG4 424 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 BST2Q10589 180 aaKnown RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 PPIL2Q13356 520 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 OR5I1Q13606 314 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZNF79Q15937 498 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 IMMTQ16891 758 aaKnown RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 PRAMEF5Q5TYX0 476 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 PRAMEF6Q5VXH4 476 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 HSDL2Q6YN16 418 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 NBPF5PQ86XG9 351 aaPredicted RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 TGIF2LYQ8IUE0 185 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 NUDCD3Q8IVD9 361 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 CDH26Q8IXH8 852 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 TPRX1Q8N7U7 411 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 NECAB1Q8N987 351 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 OR2L3Q8NG85 312 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 SLC2A14Q8TDB8 520 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 RNF139Q8WU17 664 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ACOT11Q8WXI4 607 aaPredicted RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 TMEM101Q96IK0 257 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 IMMP1LQ96LU5 166 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZNF641Q96N77 438 aaPredicted RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 RIOK2Q9BVS4 552 aaKnown RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 MFFQ9GZY8 342 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 LY9Q9HBG7 655 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZFP14Q9HCL3 533 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 DCAF16Q9NXF7 216 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 GIN1Q9NXP7 522 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 BFARQ9NZS9 450 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 SUN2Q9UH99 717 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 TMCO1Q9UM00 188 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 CELA1Q9UNI1 258 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 RABL2BQ9UNT1 228 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ASF1AQ9Y294 204 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ZNF256Q9Y2P7 627 aaPredicted RBP1.88□□□□□ -2.11
CD47-203ENST00000398258 TTC21BQ7Z4L5 1316 aa1.88□□□□□ -2.11
CD47-203ENST00000398258 ARHGEF35A5YM69 484 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 A6NIZ1 184 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 HAT1O14929 419 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 MBTPS2O43462 519 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 C1orf105O95561 183 aa1.87□□□□□ -2.11
CD47-203ENST00000398258 OXSR1O95747 527 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms