RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RPL18Q07020 188 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 MYBPHQ13203 477 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 GXYLT1Q4G148 440 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 ZNF766Q5HY98 468 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 ZNF362Q5T0B9 420 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 IGFL3Q6UXB1 125 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 UNQ6494/PRO21346Q6UXR6 183 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 HIST3H2AQ7L7L0 130 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 GALNTL5Q7Z4T8 443 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 TMEM178AQ8NBL3 297 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 FAM83FQ8NEG4 500 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 HIST1H2ACQ93077 130 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 Q96MT0 163 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 TTTY12Q9BZ98 90 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 CMC2Q9NRP2 79 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 CLN6Q9NWW5 311 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 TAS2R5Q9NYW4 299 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 B4GALT7Q9UBV7 327 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 SCOCQ9UIL1 159 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 RPH3AQ9Y2J0 694 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 PCDHGA9Q9Y5G4 932 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 CFAP47Q6ZTR5 3102 aa17.54■□□□□ 0.4
PDLIM2-205ENST00000397761 H3BML4 177 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 TLX2O43763 284 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 XPNPEP2O43895 674 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 PPP1R3DO95685 299 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 SHC1P29353 583 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 RAC1P63000 192 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 SLC35A2P78381 396 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 TLE3Q04726 772 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 RAET1LQ5VY80 246 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 MEDAGQ5VYS4 303 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 ARHGAP11AQ6P4F7 1023 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 BPIFB6Q8NFQ5 453 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 TSPAN14Q8NG11 270 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 FN3KQ9H479 309 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 FANCFQ9NPI8 374 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 KLHL1Q9NR64 748 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 FKBP14Q9NWM8 211 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 QPCTLQ9NXS2 382 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 ALKBH4Q9NXW9 302 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 TRAPPC4Q9Y296 219 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 SLC6A5Q9Y345 797 aa17.53■□□□□ 0.4
PDLIM2-205ENST00000397761 EIF4E1BA6NMX2 242 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 C1QTNF9BB2RNN3 333 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 BLOC1S5-TXNDC5H3BN57 136 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 PLPP3O14495 311 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 SMNDC1O75940 238 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 TXNDC12O95881 172 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 CD14P08571 375 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 C1QTNF9P0C862 333 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 TFPIP10646 304 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 TCEA1P23193 301 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 GDF1P27539 372 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 MEOX1P50221 254 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 ZP4Q12836 540 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 ZNF239Q16600 458 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 ALG10Q5BKT4 473 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 TMEM154Q6P9G4 183 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 FAM122BQ7Z309 247 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 ADPRHL1Q8NDY3 354 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 SLC39A7Q92504 469 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 MIB2Q96AX9 1013 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 SLC25A36Q96CQ1 311 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 SIGLEC11Q96RL6 698 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 ASPNQ9BXN1 380 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 MFRPQ9BY79 579 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 NDEL1Q9GZM8 345 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 PAK1IP1Q9NWT1 392 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 TPRKBQ9Y3C4 175 aa17.52■□□□□ 0.4
PDLIM2-205ENST00000397761 MGAQ8IWI9 3026 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 KDM4EB2RXH2 506 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 LINC01387J3KSC0 135 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 K7ENP7 123 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 M0R082 166 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 IMPA2O14732 288 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 RRP8O43159 456 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 ENTPD6O75354 484 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 HTR1AP08908 422 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 SLC15A1P46059 708 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 GFRA1P56159 465 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 TUBA4AP68366 448 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 TMEM176BQ3YBM2 270 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 AADACL4Q5VUY2 407 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 INO80CQ6PI98 192 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 YRDCQ86U90 279 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 ATP6V1C2Q8NEY4 427 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 OR14L1PQ8NHC6 308 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 ZNF417Q8TAU3 575 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 PLEKHA8Q96JA3 519 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 LRR1Q96L50 414 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 ZNF587Q96SQ5 575 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 KATNB1Q9BVA0 655 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 MRPS26Q9BYN8 205 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 TMEM185BQ9H7F4 350 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 SCN3BQ9NY72 215 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 SEC14L4Q9UDX3 406 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 PSORS1C1Q9UIG5 152 aa17.51■□□□□ 0.39
PDLIM2-205ENST00000397761 B3GALT5Q9Y2C3 310 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms