RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 NDUFB2O95178 105 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 PPP1R3DO95685 299 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 MT-ATP6P00846 226 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 RPSAP08865 295 aaKnown RBP19.05■□□□□ 0.64
CPNE1-204ENST00000397443 AHCYP23526 432 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 SMSP52788 366 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 GFRA1P56159 465 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 HYAL4Q2M3T9 481 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 SLC35F1Q5T1Q4 408 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 CASP12Q6UXS9 341 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 Q6ZS92 163 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 KDM8Q8N371 416 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 OR2T33Q8NG76 320 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 MFSD8Q8NHS3 518 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 ASPNQ9BXN1 380 aa19.05■□□□□ 0.64
CPNE1-204ENST00000397443 HTR3EA5X5Y0 456 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 E9PQ18 207 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 SULT2B1O00204 365 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 EIF1AYO14602 144 aaKnown RBP19.04■□□□□ 0.64
CPNE1-204ENST00000397443 ADORA3P0DMS8 318 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 DIO1P49895 249 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 CDC42P60953 191 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 CDK5Q00535 292 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 SRYQ05066 204 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 RPL18Q07020 188 aaKnown RBP19.04■□□□□ 0.64
CPNE1-204ENST00000397443 PMS2P3Q13401 168 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 SLX4IPQ5VYV7 408 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 THAP5Q7Z6K1 395 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 MARVELD2Q8N4S9 558 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 CLDN22Q8N7P3 220 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 OR5J2Q8NH18 312 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 CNIH3Q8TBE1 160 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 SNRNP27Q8WVK2 155 aaKnown RBP19.04■□□□□ 0.64
CPNE1-204ENST00000397443 LIPHQ8WWY8 451 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 KLHL15Q96M94 604 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 IL4I1Q96RQ9 567 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 B3GNT3Q9Y2A9 372 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 ADAM18Q9Y3Q7 739 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 SVILO95425 2214 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 ALPK2Q86TB3 2170 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 A0A0J9YW62 118 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 RPS4XP62701 263 aaKnown RBP19.04■□□□□ 0.64
CPNE1-204ENST00000397443 CD47Q08722 323 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 PGGHGQ32M88 737 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 ALG10Q5BKT4 473 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 RPL13AP3Q6NVV1 102 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 TRILQ7L0X0 811 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 ENTHD1Q8IYW4 607 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 RNF6Q9Y252 685 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 HIF3AQ9Y2N7 669 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 HDGFL3Q9Y3E1 203 aa19.04■□□□□ 0.64
CPNE1-204ENST00000397443 PLGP00747 810 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-204ENST00000397443 KLK2P20151 261 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 SLC6A6P31641 620 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 PRPS1P60891 318 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 ERVK-25P63136 954 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 MYBPC1Q00872 1141 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 SNAPC1Q16533 368 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 CTU2Q2VPK5 515 aaKnown RBP19.03■□□□□ 0.64
CPNE1-204ENST00000397443 LINC00303Q3SY05 128 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 PLEKHN1Q494U1 663 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-204ENST00000397443 NADK2Q4G0N4 442 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 TMPPEQ6ZT21 453 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 SETD9Q8NE22 299 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 TAAR6Q96RI8 345 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 TAS2R5Q9NYW4 299 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 GPR52Q9Y2T5 361 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 PCDHGB7Q9Y5F8 929 aa19.03■□□□□ 0.64
CPNE1-204ENST00000397443 EIF4E1BA6NMX2 242 aaKnown RBP19.02■□□□□ 0.64
CPNE1-204ENST00000397443 BHLHE40O14503 412 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 RNF13O43567 381 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 SMNDC1O75940 238 aaKnown RBP eCLIP19.02■□□□□ 0.641e-15■■■■□ 21.1
CPNE1-204ENST00000397443 WISP2O76076 250 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 OR6A2O95222 327 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 SLC2A10O95528 541 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 FKBP2P26885 142 aaKnown RBP19.02■□□□□ 0.64
CPNE1-204ENST00000397443 NOS3P29474 1203 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 UQCRC1P31930 480 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 SUCLG1P53597 346 aaKnown RBP19.02■□□□□ 0.64
CPNE1-204ENST00000397443 ISL1P61371 349 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 TOP3AQ13472 1001 aaPredicted RBP19.02■□□□□ 0.64
CPNE1-204ENST00000397443 IL18R1Q13478 541 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 C12orf73Q69YU5 71 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 PTCHD4Q6ZW05 846 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 TCEANCQ8N8B7 351 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 KATNB1Q9BVA0 655 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 SLC25A19Q9HC21 320 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 QPCTLQ9NXS2 382 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 ALKBH4Q9NXW9 302 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 LHX6Q9UPM6 363 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 IER3IP1Q9Y5U9 82 aa19.02■□□□□ 0.64
CPNE1-204ENST00000397443 TLN1Q9Y490 2541 aaKnown RBP19.02■□□□□ 0.64
CPNE1-204ENST00000397443 BSNQ9UPA5 3926 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 IGHV3-15A0A0B4J1V0 119 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 GJE1A6NN92 205 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 CLK1P49759 484 aaKnown RBP19.02■□□□□ 0.63
CPNE1-204ENST00000397443 CTXN1P60606 82 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 SGCBQ16585 318 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 GGNQ86UU5 652 aa19.02■□□□□ 0.63
CPNE1-204ENST00000397443 ZNF786Q8N393 782 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms