RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ICOSLGO75144 302 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SERPINI2O75830 405 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 KRT8P05787 483 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 MYF5P13349 255 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 PSMB10P40306 273 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 GBX2P52951 348 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SIRPAP78324 504 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SLC35D3Q5M8T2 416 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SNAP47Q5SQN1 464 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 LEG1Q6P5S2 330 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 OR6K6Q8NGW6 343 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 PCED1AQ9H1Q7 454 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 MMP25Q9NPA2 562 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 GNG8Q9UK08 70 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 ADAMTS20P59510 1910 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 LANCL1O43813 399 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 BCKDHBP21953 392 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 GRK6P43250 576 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 HSD11B2P80365 405 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 QPRTQ15274 297 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 DUSP18Q8NEJ0 188 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 TRMT10AQ8TBZ6 339 aaKnown RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 SNX33Q8WV41 574 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 SMAD5Q99717 465 aaKnown RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 NUFIP1Q9UHK0 495 aaKnown RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 SPEGQ15772 3267 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 CDC14CA4D256 554 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 IDSB3KWA1 339 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 IDH3BO43837 385 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 IGF2P01344 180 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 RAB3BP20337 219 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 CSF2RBP32927 897 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 VWA2Q5GFL6 755 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 C10orf53Q8N6V4 93 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 EXD3Q8N9H8 876 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 SLC7A6Q92536 515 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 TSSK2Q96PF2 358 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 GAL3ST4Q96RP7 486 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 RP1P56715 2156 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 UNC13CQ8NB66 2214 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 PCNX3Q9H6A9 2034 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 ASAH2BP0C7U1 165 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 TRAPPC2P0DI81 140 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 TRAPPC2BP0DI82 140 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 PSKH1P11801 424 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 FOLR1P15328 257 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 NPR2P20594 1047 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 ZP2Q05996 745 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 SF3A2Q15428 464 aaKnown RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 CEP78Q5JTW2 689 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 C9orf40Q8IXQ3 194 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 OR5H6Q8NGV6 325 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 OIT3Q8WWZ8 545 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 KTI12Q96EK9 354 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 PDCD1LG2Q9BQ51 273 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 MOV10Q9HCE1 1003 aaKnown RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 RPRD1BQ9NQG5 326 aaKnown RBP15.09■□□□□ 0.01
TRIM39-205ENST00000396551 NANSQ9NR45 359 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 NLKQ9UBE8 527 aa15.09■□□□□ 0.01
TRIM39-205ENST00000396551 TRAV1-2A0A0B4J238 106 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 GLCEO94923 617 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 PRKAR1AP10644 381 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 EDNRAP25101 427 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 GRPRP30550 384 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 UQCRC1P31930 480 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 SCAIQ8N9R8 606 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 RNF166Q96A37 237 aaPredicted RBP15.08■□□□□ 0.01
TRIM39-205ENST00000396551 MVB12AQ96EY5 273 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 DMRTB1Q96MA1 342 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 WACQ9BTA9 647 aa15.08■□□□□ 0.01
TRIM39-205ENST00000396551 A0A0B4J203 849 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 TCRBV16S1A1N1A0A5B0 115 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 GMFGO60234 142 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 CD14P08571 375 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 ZNF117Q03924 483 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 IL10RAQ13651 578 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 EBPQ15125 230 aaKnown RBP15.08■□□□□ 0
TRIM39-205ENST00000396551 SF3B4Q15427 424 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM39-205ENST00000396551 MZT2BQ6NZ67 158 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 RPL22L1Q6P5R6 122 aaKnown RBP15.08■□□□□ 0
TRIM39-205ENST00000396551 PLET1Q6UQ28 207 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 LSM14AQ8ND56 463 aaKnown RBP15.08■□□□□ 0
TRIM39-205ENST00000396551 TRIM63Q969Q1 353 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 UPRTQ96BW1 309 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 LPAR4Q99677 370 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 ALG12Q9BV10 488 aa15.08■□□□□ 0
TRIM39-205ENST00000396551 TRBV2A0A0J9YWF9 115 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 A0A1B0GVT2 93 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 HTR3EA5X5Y0 456 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 PSMD9O00233 223 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 SERPINA3P01011 423 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 F13BP05160 661 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 UCHL1P09936 223 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 ATF1P18846 271 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 TACR3P29371 465 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 RBMS1P29558 406 aaKnown RBP15.07■□□□□ 0
TRIM39-205ENST00000396551 CTXN1P60606 82 aa15.07■□□□□ 0
TRIM39-205ENST00000396551 ELAVL1Q15717 326 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms