RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SLAMF7Q9NQ25 335 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 IGLV3-10A0A075B6K4 115 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 IL2RGP31785 369 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 THBS3P49746 956 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TATDN3Q17R31 274 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SLC35D3Q5M8T2 416 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 KCNIP4Q6PIL6 250 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 COMMD7Q86VX2 200 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 EID2Q8N6I1 236 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SUMF2Q8NBJ7 301 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SGK3Q96BR1 496 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 BTF3L4Q96K17 158 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 UBL7Q96S82 380 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 STACQ99469 402 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM59Q9BXS4 323 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 METTL9Q9H1A3 318 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CDC14CA4D256 554 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 FRS3O43559 492 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MED6O75586 246 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SERPINA7P05543 415 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CDK4P11802 303 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 KITLGP21583 273 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 GIFP27352 417 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 C3orf38Q5JPI3 329 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 OR5M10Q6IEU7 315 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 FBXW12Q6X9E4 464 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RAB3CQ96E17 227 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PRDM9Q9NQV7 894 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 FAM212BQ9NTI7 297 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MUTYHQ9UIF7 546 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RGPD4Q7Z3J3 1758 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 KNTC1P50748 2209 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SYT5O00445 386 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 GPR171O14626 319 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SNAPINO95295 136 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 DDAH2O95865 285 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MT-ATP6P00846 226 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 F13BP05160 661 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 HEXAP06865 529 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RAB4AP20338 218 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ALDH3B1P43353 468 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 VEGFCP49767 419 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MTCP1P56278 107 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CARD18P57730 90 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 HTD2P86397 168 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ERV3-1Q14264 604 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 GTDC1Q4AE62 458 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 LCN10Q6JVE6 187 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 L3MBTL4Q8NA19 623 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 DUSP19Q8WTR2 217 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MIB2Q96AX9 1013 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SLC29A1Q99808 456 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TCEAL7Q9BRU2 100 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 GCM1Q9NP62 436 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TARM1B6A8C7 271 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF593O00488 134 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MSTNO14793 375 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 BCL7AQ4VC05 210 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SFRP5Q5T4F7 317 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 METRNLQ641Q3 311 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 FCRLAQ7L513 359 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RNF175Q8N4F7 328 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CLDN22Q8N7P3 220 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ARRDC2Q8TBH0 407 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SSX3Q99909 188 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 OCSTAMPQ9BR26 566 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MCOLN1Q9GZU1 580 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 DYNLRB1Q9NP97 96 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 KRBA1A5PL33 1030 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 BTBD17A6NE02 478 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TNFRSF10AO00220 468 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CHATP28329 748 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 C21orf33P30042 268 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TLE4Q04727 773 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 GPR19Q15760 415 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF808Q8N4W9 903 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ESX1Q8N693 406 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF419Q96HQ0 510 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 HRASLS5Q96KN8 279 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MMP28Q9H239 520 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 KIR3DX1Q9H7L2 352 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 LYRM4Q9HD34 91 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PADI1Q9ULC6 663 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NUMBLQ9Y6R0 609 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SERINC4A6NH21 518 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SIGLEC6O43699 453 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NUDT21O43809 227 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TIMM8AO60220 97 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SEC61A1P61619 476 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RACK1P63244 317 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SCGB2A2Q13296 93 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF74Q16587 644 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 AARDQ4LEZ3 155 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 OR7E24Q6IFN5 339 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PTRH1Q86Y79 214 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 KLHDC9Q8NEP7 349 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NPRL2Q8WTW4 380 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 DAZAP1Q96EP5 407 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ZBED3Q96IU2 234 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms