RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TRMT12Q53H54 448 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FBXO42Q6P3S6 717 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR1J4Q8NGS1 313 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 C16orf58Q96GQ5 468 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 KLHL9Q9P2J3 617 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GPR160Q9UJ42 338 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 COL4A4P53420 1690 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FITM1A5D6W6 292 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 H2BFMP0C1H6 154 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CASP9P55211 416 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MAZP56270 477 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 DLX2Q07687 328 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SMCO1Q147U7 214 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF141Q15928 474 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR2A2Q6IF42 318 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CA13Q8N1Q1 262 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SLCO4A1Q96BD0 722 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SMIM19Q96E16 107 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 KATNB1Q9BVA0 655 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FOXQ1Q9C009 403 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 NGBQ9NPG2 151 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RLIMQ9NVW2 624 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TP53P04637 393 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 IGHV4-34P06331 123 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 UBBP0CG47 229 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TBXA2RP21731 343 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 LTBRP36941 435 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR12D2P58182 307 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SIRPAP78324 504 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZFP69Q49AA0 526 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CEP78Q5JTW2 689 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 POMZP3Q6PJE2 187 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR5J2Q8NH18 312 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF681Q96N22 645 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A21Q9BQT8 299 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TRIM8Q9BZR9 551 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 LHPPQ9H008 270 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RGCCQ9H4X1 137 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 DOPEY1Q5JWR5 2465 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SSNA1O43805 119 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RBBP9O75884 186 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 UBL3O95164 117 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SERPINA5P05154 406 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MAOBP27338 520 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 IDUAP35475 653 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TSTQ16762 297 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 HLA-BQ31612 363 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM201Q5SNT2 666 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 FAM69BQ5VUD6 431 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF793Q6ZN11 406 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 H1FNTQ75WM6 255 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR6N2Q8NGY6 317 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CTHRC1Q96CG8 243 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 VSTM2LQ96N03 204 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GHRLQ9UBU3 117 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 KCNIP3Q9Y2W7 256 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 IQCMA0A1B0GVH7 501 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PLD2O14939 933 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 LCMT2O60294 686 aaKnown RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 UTS2O95399 124 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 IL33O95760 270 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 UCHL1P09936 223 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ANXA3P12429 323 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 EVI2BP34910 448 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 THBS2P35442 1172 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF528Q3MIS6 628 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM69Q5SWH9 247 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OGFOD3Q6PK18 319 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PGAP1Q75T13 922 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TRILQ7L0X0 811 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TRIM73Q86UV7 250 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF101Q8IZC7 436 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 FAM160A2Q8N612 972 aaPredicted RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PLPP5Q8NEB5 264 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OR7G2Q8NG99 324 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CPT1CQ8TCG5 803 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 KCNE4Q8WWG9 221 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SGCDQ92629 289 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MUL1Q969V5 352 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CSF3RQ99062 836 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 AMBRA1Q9C0C7 1298 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ZC4H2Q9NQZ6 224 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 RHCGQ9UBD6 479 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 DHCR7Q9UBM7 475 aaKnown RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MRPS2Q9Y399 296 aaKnown RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 TACR3P29371 465 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MPLP40238 635 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 BNIP3Q12983 259 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SSPNQ14714 243 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 PRTGQ2VWP7 1150 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 CPEB2Q7Z5Q1 589 aaKnown RBP3.11□□□□□ -1.91
VPS13C-203ENST00000395896 MSRB3Q8IXL7 192 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 ENTHD1Q8IYW4 607 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 RCBTB1Q8NDN9 531 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 OR2Y1Q8NGV0 311 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 SNX18Q96RF0 628 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 RBCK1Q9BYM8 510 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 STARD5Q9NSY2 213 aa3.11□□□□□ -1.91
VPS13C-203ENST00000395896 FBXL3Q9UKT7 428 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms