RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PRELID3BQ9Y3B1 194 aa15.05■□□□□ -0
PHTF1-205ENST00000393357 NOP16Q9Y3C1 178 aaKnown RBP15.05■□□□□ -0
PHTF1-205ENST00000393357 C13orf42A0A1B0GVH6 325 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 TMEM72A0PK05 275 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 F5H0A9 414 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 AKR7A3O95154 331 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 NFATC1O95644 943 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 GIPP09681 153 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 MST1P26927 711 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 DLX5P56178 289 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 DMKNQ6E0U4 476 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 MFSD12Q6NUT3 480 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 HTR3DQ70Z44 454 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 RANBP3LQ86VV4 465 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 FOXRED2Q8IWF2 684 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 CDH26Q8IXH8 852 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 HMX1Q9NP08 348 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 NRIP3Q9NQ35 241 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 MEPEQ9NQ76 525 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 EXOSC3Q9NQT5 275 aaKnown RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 V9GY05 133 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 TRIOO75962 3097 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 CFAP54Q96N23 3096 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 IGKV1-8A0A0C4DH67 115 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 A0A1B0GUH1 482 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 A0A1W2PQ45 241 aaPredicted RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 A0A1W2PQY0 241 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 SERPINA3P01011 423 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 TAS2R20P59543 309 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 AP3S2P59780 193 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 CDK5R1Q15078 307 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 LCTLQ6UWM7 567 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 OR2AK2Q8NG84 335 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 F8W036 122 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 PRAMEF2O60811 474 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 CTNSO60931 367 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 FGF2P09038 288 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 BLOC1S1P78537 153 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 SLC35F2Q8IXU6 374 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 OR1S2Q8NGQ3 325 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 PPP1R14AQ96A00 147 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 GFI1Q99684 422 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 SLITRK2Q9H156 845 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 OR52A5Q9H2C5 316 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 RETREG1Q9H6L5 497 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 ESRP2Q9H6T0 727 aaKnown RBP15.04■□□□□ -0
PHTF1-205ENST00000393357 ABRACLQ9P1F3 81 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 PPIL1Q9Y3C6 166 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 NPFFR2Q9Y5X5 522 aa15.04■□□□□ -0
PHTF1-205ENST00000393357 TSPAN11A1L157 253 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 IGLON5A6NGN9 336 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 CACNB4O00305 520 aaPredicted RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 GALR3O60755 368 aaPredicted RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 TGM6O95932 706 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 VAMP1P23763 118 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 CAPZA2P47755 286 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 SRSF3P84103 164 aaKnown RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 SWI5Q1ZZU3 235 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 IFNL1Q8IU54 200 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 OR56A1Q8NGH5 318 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 PARP12Q9H0J9 701 aaKnown RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 KRCC1Q9NPI7 259 aaPredicted RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 C14orf105Q9NVL8 296 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 SAGE1Q9NXZ1 904 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 PLXNB3Q9ULL4 1909 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3DA0A087WVF3 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3IA0A087WXS9 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3EA0A087X179 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3KA0A087X1G2 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 ARPC4-TTLL3A0A0A6YYG9 625 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 GXYLT2A0PJZ3 443 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TRAPPC13A5PLN9 417 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3BA6NDS4 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3FA6NER0 549 aaPredicted RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3LB9A6J9 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 MCIDASD6RGH6 385 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 SC5DO75845 299 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 RCBTB2O95199 551 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 LDOC1O95751 146 aaPredicted RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 RPN2P04844 631 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3HP0C7X1 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 GABRA3P34903 492 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 CBX5P45973 191 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 ZNF234Q14588 700 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 DMRTC1Q5HYR2 192 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 ZNF626Q68DY1 528 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3GQ6DHY5 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3CQ6IPX1 549 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TMEM71Q6P5X7 295 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 TBC1D3Q8IZP1 549 aaPredicted RBP15.03■□□□□ -0
PHTF1-205ENST00000393357 OR6V1Q8N148 313 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 OR10G6Q8NH81 332 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 PRSS27Q9BQR3 290 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 CMC2Q9NRP2 79 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 STARD5Q9NSY2 213 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 ST6GALNAC2Q9UJ37 374 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 SLC35A3Q9Y2D2 325 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 FAM96BQ9Y3D0 163 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 LAMA1P25391 3075 aa15.03■□□□□ -0
PHTF1-205ENST00000393357 GABARAPH6UMI1 98 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms