RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 UBCP0CG48 685 aaKnown RBP7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ACTBP60709 375 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 VAMP2P63027 116 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ACTG1P63261 375 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PRKCDQ05655 676 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PUDPQ08623 228 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PLAG1Q6DJT9 500 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 SLC35D2Q76EJ3 337 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 CPOQ8IVL8 374 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 OR2Y1Q8NGV0 311 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 CT55Q8WUE5 264 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 TCEAL3Q969E4 200 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF583Q96ND8 569 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 MED28Q9H204 178 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PRDM7Q9NQW5 492 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 RP1L1Q8IWN7 2480 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-203ENST00000393287 A0A1W2PQD3 144 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 TMPRSS11DO60235 418 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 SLC16A7O60669 478 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 GABRA1P14867 456 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 MXD1Q05195 221 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 DUSP5Q16690 384 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF585AQ6P3V2 769 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 GALNT10Q86SR1 603 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 TPRA1Q86W33 373 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 GJC3Q8NFK1 279 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 OR2I1PQ8NGU4 316 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 OR2V1Q8NHB1 315 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 OR2A5Q96R48 311 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 SMURF1Q9HCE7 757 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PCDHB10Q9UN67 800 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 B3GALT5Q9Y2C3 310 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 GPR179Q6PRD1 2367 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 EME2A4GXA9 379 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-203ENST00000393287 CYB5BO43169 146 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF254O75437 659 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 CD14P08571 375 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 RAC2P15153 192 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 MMP11P24347 488 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 S100A7P31151 101 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PYCR1P32322 319 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 RGS6P49758 472 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 TMPRSS3P57727 454 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF404Q494X3 552 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 KIF18BQ86Y91 864 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 PARP8Q8N3A8 854 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 OR7G2Q8NG99 324 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 TUBB1Q9H4B7 451 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 P4HTMQ9NXG6 502 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 KCNIP3Q9Y2W7 256 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 hCG_1807616A0A1W2PRN6 198 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 LCKP06239 509 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ETV6P41212 452 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 STK11Q15831 433 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF684Q5T5D7 378 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF691Q5VV52 312 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 AWAT2Q6E213 333 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 ZNF425Q6IV72 752 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 RNF175Q8N4F7 328 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 C17orf47Q8NEP4 570 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 APOBEC4Q8WW27 367 aaKnown RBP7.45□□□□□ -1.22
ATXN3-203ENST00000393287 SORCS2Q96PQ0 1159 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 CHRNA10Q9GZZ6 450 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 FBXL4Q9UKA2 621 aa7.45□□□□□ -1.22
ATXN3-203ENST00000393287 GOLGA4Q13439 2230 aaKnown RBP7.45□□□□□ -1.22
ATXN3-203ENST00000393287 FAM25EA8MYX2 175 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 TNFRSF21O75509 655 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 TSPAN9O75954 239 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 CHMP24386 653 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 RNF144AP50876 292 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-203ENST00000393287 KLBQ86Z14 1044 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 CCDC71LQ8N9Z2 235 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 SDR9C7Q8NEX9 313 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 C16orf52Q8NHV5 167 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 TNFAIP8L1Q8WVP5 186 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 TIMD4Q96H15 378 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 MYOTQ9UBF9 498 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 DOCK5Q9H7D0 1870 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 B4GAT1O43505 415 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 RAB3BP20337 219 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 HTR5AP47898 357 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 FRMPD2BQ6IN97 320 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 CNIH3Q8TBE1 160 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 BRIX1Q8TDN6 353 aaKnown RBP7.44□□□□□ -1.22
ATXN3-203ENST00000393287 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
ATXN3-203ENST00000393287 SCARF2Q96GP6 870 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-203ENST00000393287 LIN37Q96GY3 246 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-203ENST00000393287 NUDT22Q9BRQ3 303 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 WACQ9BTA9 647 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 POTEKPQ9BYX7 375 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 PRMT8Q9NR22 394 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-203ENST00000393287 UCKL1Q9NWZ5 548 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 ITGB1BP2Q9UKP3 347 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 CLEC4AQ9UMR7 237 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 IGHV5-10-1A0A0J9YXX1 117 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 TMEM127O75204 238 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 SERPINA5P05154 406 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 FOLR1P15328 257 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 GAB1Q13480 694 aa7.44□□□□□ -1.22
ATXN3-203ENST00000393287 GAB4Q2WGN9 574 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms