RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NCDNQ9UBB6 729 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 H7C1C5 153 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 MED6O75586 246 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 MSL3P1P0C860 447 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 CST5P28325 142 aaPredicted RBP12.18□□□□□ -0.46
LCA5-202ENST00000392959 TEAD1P28347 426 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TAS2R46P59540 309 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 LCN6P62502 163 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 HTR4Q13639 388 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 OR10K1Q8NGX5 313 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 OR4K15Q8NH41 348 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 NUDT8Q8WV74 236 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 LOC102725191A0A1B0GVB3 256 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 SERINC4A6NH21 518 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ATP1B1P05026 303 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TACR3P29371 465 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 AFF3P51826 1226 aaKnown RBP12.18□□□□□ -0.46
LCA5-202ENST00000392959 ERVK-16P61578 105 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 EEF1A1P68104 462 aaKnown RBP12.18□□□□□ -0.46
LCA5-202ENST00000392959 CCSMST1Q4G0I0 132 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 GDF7Q7Z4P5 450 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 RADILQ96JH8 1075 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ADAM18Q9Y3Q7 739 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 NUP98P52948 1817 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TRABD2BA6NFA1 517 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TNFSF12O43508 249 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 F11P03951 625 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 IRF2P14316 349 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 CD79BP40259 229 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ATP1B3P54709 279 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ACTBL2Q562R1 376 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ZMAT1Q5H9K5 638 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 WDSUB1Q8N9V3 476 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TMEM255BQ8WV15 326 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 MIB2Q96AX9 1013 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
LCA5-202ENST00000392959 SLC41A2Q96JW4 573 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 CMSS1Q9BQ75 279 aaKnown RBP12.18□□□□□ -0.46
LCA5-202ENST00000392959 P2RY12Q9H244 342 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 PPT2Q9UMR5 302 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 OTOL1A6NHN0 477 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 K7EPK0 472 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 ZNF195O14628 629 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 TXNL1O43396 289 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 PDGFAP04085 211 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 ESCO2Q56NI9 601 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 RSPRY1Q96DX4 576 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 TMEM59Q9BXS4 323 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 ULBP2Q9BZM5 246 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 NMNAT2Q9BZQ4 307 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 DUSP21Q9H596 190 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 PLCXD1Q9NUJ7 323 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 NDRG4Q9ULP0 352 aaKnown RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 HCFC2Q9Y5Z7 792 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 ZNF705FA8MVS1 300 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 ZNF705DP0CH99 300 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 ZNF705BP0CI00 300 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 ZNF44P15621 663 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 MMP21Q8N119 569 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 IL1F10Q8WWZ1 152 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 CNTNAP3Q9BZ76 1288 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 C1orf198Q9H425 327 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 EMC7Q9NPA0 242 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 C19orf12Q9NSK7 152 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 C5P01031 1676 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 F5P12259 2224 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 ANKRD30BLA7E2S9 258 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 LAMTOR5O43504 91 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 PRKRAO75569 313 aaKnown RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 GJA4P35212 333 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 DDOSTP39656 456 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 OR1D4P47884 311 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 CCR9P51686 369 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 GP2P55259 537 aaKnown RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 ACVR1Q04771 509 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 SLC48A1Q6P1K1 146 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 GAREM2Q75VX8 874 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 SLC16A11Q8NCK7 471 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 CDCA3Q99618 268 aaPredicted RBP12.17□□□□□ -0.46
LCA5-202ENST00000392959 VN1R3Q9BXE9 311 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 TAAR2Q9P1P5 351 aa12.17□□□□□ -0.46
LCA5-202ENST00000392959 MYO7AQ13402 2215 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 TEX51A0A1B0GUA7 166 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 TMEM129A0AVI4 362 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 A6NCN8 305 aa12.16□□□□□ -0.46
LCA5-202ENST00000392959 HIDE1A8MVS5 230 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms