RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 LRRN3E7EW58 273 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 M0R082 166 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 FKBP6O75344 327 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 VAMP5O95183 116 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 IL18BPO95998 194 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CST1P01037 141 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 LDLRP01130 860 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 HIST1H2ABP04908 130 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 AGAP20933 346 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CHRNB4P30926 498 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 OPRM1P35372 400 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 HMGA2P52926 109 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CTBP2P56545 445 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 ACTR3P61158 418 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 PRKCDQ05655 676 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 SRSF1Q07955 248 aaKnown RBP eCLIP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 FOXF2Q12947 444 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 TMEM225Q6GV28 225 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 ABLIM2Q6H8Q1 611 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 XKRXQ6PP77 449 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 TBPL2Q6SJ96 375 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 H1FNTQ75WM6 255 aaPredicted RBP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 HIST3H2AQ7L7L0 130 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CCDC71Q8IV32 467 aaPredicted RBP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 ZNF417Q8TAU3 575 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 HIST1H2ACQ93077 130 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 SLCO4A1Q96BD0 722 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 SDCCAG3Q96C92 435 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 SGTBQ96EQ0 304 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 DUS3LQ96G46 650 aaKnown RBP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 ALPK1Q96QP1 1244 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 ZNF587Q96SQ5 575 aaPredicted RBP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 PSD2Q9BQI7 771 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 FUZQ9BT04 418 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 SFXN3Q9BWM7 321 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 BCO1Q9HAY6 547 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 TMCC3Q9ULS5 477 aa13.3□□□□□ -0.28
SUMO1-203ENST00000392246 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
SUMO1-203ENST00000392246 CLEC18AA5D8T8 446 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 WIPF3A6NGB9 483 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 TNFRSF11BO00300 401 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 PIP5K1CO60331 668 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SS18L1O75177 396 aaPredicted RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 YES1P07947 543 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 IFI30P13284 250 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 FUT1P19526 365 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 P2RY4P51582 365 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SLC16A1P53985 500 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 PMS2P3Q13401 168 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 KPNB1Q14974 876 aaKnown RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 GUSBP1Q15486 140 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 CLEC18BQ6UXF7 455 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 C10orf67Q8IYJ2 551 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ZNF808Q8N4W9 903 aaPredicted RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 CNEP1R1Q8N9A8 125 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 CLEC18CQ8NCF0 446 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ADPRHL1Q8NDY3 354 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 OR5J2Q8NH18 312 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ITLN2Q8WWU7 325 aaPredicted RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 LIPHQ8WWY8 451 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 TACO1Q9BSH4 297 aaKnown RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SF3B5Q9BWJ5 86 aaKnown RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 REEP1Q9H902 201 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 KRCC1Q9NPI7 259 aaPredicted RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 EMC3Q9P0I2 261 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 KLHL13Q9P2N7 655 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 CLEC4AQ9UMR7 237 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 RASD1Q9Y272 281 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 EMC9Q9Y3B6 208 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 LYVE1Q9Y5Y7 322 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 IGKV3D-15A0A087WSY6 115 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 A0A1W2PNV4 684 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SH3PXD2BA1X283 911 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ERICH4A6NGS2 130 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ZNF716A6NP11 495 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ZNF724A8MTY0 619 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 GNGT2O14610 69 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 DVL2O14641 736 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 RAMP1O60894 148 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 TNFSF13O75888 250 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 OR7A10O76100 309 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 ASAH2BP0C7U1 165 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 KIR2DL2P43627 348 aaPredicted RBP13.29□□□□□ -0.28
SUMO1-203ENST00000392246 LIMS1P48059 325 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 GK3PQ14409 553 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SLC17A1Q14916 467 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SEC23BQ15437 767 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 SLC46A3Q7Z3Q1 461 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 GPAT4Q86UL3 456 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 TUSC5Q8IXB3 177 aa13.29□□□□□ -0.28
SUMO1-203ENST00000392246 LRRC17Q8N6Y2 441 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms