RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GRM7Q14831 915 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 DCST2Q5T1A1 773 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 OR13C3Q8NGS6 347 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 TMEM106AQ96A25 262 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 IL21RQ9HBE5 538 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 FGF9P31371 208 aaPredicted RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 IGFALSP35858 605 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 TDGQ13569 410 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 EXOSC7Q15024 291 aaKnown RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 RPE65Q16518 533 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 OR11H7Q8NGC8 314 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 PFN4Q8NHR9 129 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 TRAV20A0A0B4J274 112 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 GABARAPH6UMI1 98 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 SYT5O00445 386 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 FKTNO75072 461 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 ATP5A1P25705 553 aaKnown RBP13.2□□□□□ -0.3
RTF1-201ENST00000389629 ITGB7P26010 798 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 SLC6A1P30531 599 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 OR5M1Q8NGP8 315 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 NMNAT3Q96T66 252 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 ISYNA1Q9NPH2 558 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 DZANK1Q9NVP4 752 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 ADAM29Q9UKF5 820 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 PRELID3BQ9Y3B1 194 aa13.2□□□□□ -0.3
RTF1-201ENST00000389629 ZNF208O43345 1280 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 MED6O75586 246 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 HSD11B1P28845 292 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 OPRD1P41143 372 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 CDK3Q00526 305 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 DEFA6Q01524 100 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 PXKQ7Z7A4 578 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 OR2T4Q8NH00 348 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 RAB7BQ96AH8 199 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 TAPBPLQ9BX59 468 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 BORCS7-ASMTA0A0B4J1R7 106 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 C17orf113A0A1B0GUU1 675 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 LRIT2A6NDA9 550 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 TYRP1P17643 537 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 AMY2BP19961 511 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
RTF1-201ENST00000389629 DEFB115Q30KQ5 88 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 THRSPQ92748 146 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 ORAI3Q9BRQ5 295 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 MEIKINA0A087WXM9 373 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
RTF1-201ENST00000389629 SLC6A9P48067 706 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 TAS2R19P59542 299 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 VAMP2P63027 116 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 LGALSLQ3ZCW2 172 aaPredicted RBP13.19□□□□□ -0.3
RTF1-201ENST00000389629 C14orf28Q4W4Y0 310 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 IGSF11Q5DX21 431 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 STEAP1BQ6NZ63 245 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 METTL27Q8N6F8 245 aaPredicted RBP13.19□□□□□ -0.3
RTF1-201ENST00000389629 ZNF511Q8NB15 262 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 OR10Z1Q8NGY1 313 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 OR2L8Q8NGY9 312 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 OR2AJ1Q8NGZ0 328 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 C10orf90Q96M02 699 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 SGPP1Q9BX95 441 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 RPS10-NUDT3A0A1W2PQS6 291 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 GPRIN2O60269 458 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 CDK2P24941 298 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 RPS10P46783 165 aaKnown RBP13.19□□□□□ -0.3
RTF1-201ENST00000389629 REEP5Q00765 189 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 ZNF674Q2M3X9 581 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 MRI1Q9BV20 369 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 ZDHHC5Q9C0B5 715 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
RTF1-201ENST00000389629 OR51B4Q9Y5P0 310 aa13.19□□□□□ -0.3
RTF1-201ENST00000389629 FCMRO60667 390 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 NME2P22392 152 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 SELENOPP49908 381 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 SPOCK1Q08629 439 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 ZNF620Q6ZNG0 422 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 CDRT4Q8N9R6 151 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 ST7LQ8TDW4 575 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 TTC9Q92623 222 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 LINC00862A6NCI5 91 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 FFAR1O14842 300 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 SHOXO15266 292 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 LANCL1O43813 399 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 DOK2O60496 412 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 SRPX2O60687 465 aaPredicted RBP13.18□□□□□ -0.3
RTF1-201ENST00000389629 ZNF28P17035 718 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 CSNK1G2P78368 415 aa13.18□□□□□ -0.3
RTF1-201ENST00000389629 LINC00303Q3SY05 128 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms