RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 MFSD8Q8NHS3 518 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 ZNF417Q8TAU3 575 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 ZNF582Q96NG8 517 aaPredicted RBP24.16■■□□□ 1.46
MSX1-201ENST00000382723 ZNF587Q96SQ5 575 aaPredicted RBP24.16■■□□□ 1.46
MSX1-201ENST00000382723 PIGQQ9BRB3 760 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 CCDC90BQ9GZT6 254 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 PLCXD1Q9NUJ7 323 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 ERVK-18Q9QC07 812 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 CSAG2Q9Y5P2 127 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 A0A1W2PNR3 127 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 FAM183AA6NL82 134 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 C11orf98E9PRG8 122 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 GTF2E2P29084 291 aaKnown RBP24.16■■□□□ 1.46
MSX1-201ENST00000382723 ANKDD1AQ495B1 522 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 SLC25A43Q8WUT9 341 aaPredicted RBP24.16■■□□□ 1.46
MSX1-201ENST00000382723 SMPDL3BQ92485 455 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 TAPBPLQ9BX59 468 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 TAS2R5Q9NYW4 299 aa24.16■■□□□ 1.46
MSX1-201ENST00000382723 MPDZO75970 2070 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 ADORA3P0DMS8 318 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 ZNF17P17021 662 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 CTXN1P60606 82 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 SLC35A2P78381 396 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 SGCBQ16585 318 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 ZNF766Q5HY98 468 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 ARHGAP11AQ6P4F7 1023 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 ZNF773Q6PK81 442 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 SPACA3Q8IXA5 215 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 LRRC75AQ8NAA5 344 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 OR6S1Q8NH40 331 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 GGHQ92820 318 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 DUSP21Q9H596 190 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 NRIP3Q9NQ35 241 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 CMC2Q9NRP2 79 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 PSORS1C1Q9UIG5 152 aa24.15■■□□□ 1.46
MSX1-201ENST00000382723 LIPT2A6NK58 231 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 RIIAD1A6NNX1 92 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 HTR1AP08908 422 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 TSPAN19P0C672 248 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 AHCYP23526 432 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 MEOX1P50221 254 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 PLGLB1Q02325 96 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 WIPI1Q5MNZ9 446 aaPredicted RBP24.14■■□□□ 1.46
MSX1-201ENST00000382723 SLC25A30Q5SVS4 291 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 MEDAGQ5VYS4 303 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 CPOQ8IVL8 374 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 ANKK1Q8NFD2 765 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 DCBLD2Q96PD2 775 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 TTTY12Q9BZ98 90 aa24.14■■□□□ 1.46
MSX1-201ENST00000382723 CCDC86Q9H6F5 360 aaKnown RBP24.14■■□□□ 1.46
MSX1-201ENST00000382723 HINT3Q9NQE9 182 aaKnown RBP24.14■■□□□ 1.46
MSX1-201ENST00000382723 CLCA1A8K7I4 914 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 FAM166BA8MTA8 275 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 RNF13O43567 381 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 SERPINI2O75830 405 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 OR6A2O95222 327 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 HIST1H1CP16403 213 aaKnown RBP24.14■■□□□ 1.45
MSX1-201ENST00000382723 TNFSF10P50591 281 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 B3GALT5-AS1P59052 145 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 PLBD1Q6P4A8 553 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 CXXC5Q7LFL8 322 aaKnown RBP24.14■■□□□ 1.45
MSX1-201ENST00000382723 OR4K13Q8NH42 304 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 GPX7Q96SL4 187 aaPredicted RBP24.14■■□□□ 1.45
MSX1-201ENST00000382723 COPS4Q9BT78 406 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 NDEL1Q9GZM8 345 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 MED20Q9H944 212 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 MRPL39Q9NYK5 338 aaKnown RBP24.14■■□□□ 1.45
MSX1-201ENST00000382723 B4GALT7Q9UBV7 327 aa24.14■■□□□ 1.45
MSX1-201ENST00000382723 KLRC4-KLRK1H3BQV0 150 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 PLPP3O14495 311 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 CEACAM4O75871 244 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 CD14P08571 375 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 EIF2S3P41091 472 aaKnown RBP24.13■■□□□ 1.45
MSX1-201ENST00000382723 DBPQ10586 325 aaPredicted RBP24.13■■□□□ 1.45
MSX1-201ENST00000382723 MFSD13AQ14CX5 517 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 CYB561A3Q8NBI2 242 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 FAM98AQ8NCA5 519 aaKnown RBP24.13■■□□□ 1.45
MSX1-201ENST00000382723 BBS1Q8NFJ9 593 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 OR52E2Q8NGJ4 325 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 RASD2Q96D21 266 aa24.13■■□□□ 1.45
MSX1-201ENST00000382723 ZNF703Q9H7S9 590 aaPredicted RBP24.13■■□□□ 1.45
MSX1-201ENST00000382723 CFAP47Q6ZTR5 3102 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 TFAP2AP05549 437 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 ZNF3P17036 446 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 FKBP2P26885 142 aaKnown RBP24.12■■□□□ 1.45
MSX1-201ENST00000382723 ID4P47928 161 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 OR2B6P58173 313 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 TUBA4AP68366 448 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 ZNF362Q5T0B9 420 aaPredicted RBP24.12■■□□□ 1.45
MSX1-201ENST00000382723 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.12■■□□□ 1.45
MSX1-201ENST00000382723 IPCEF1Q8WWN9 437 aaPredicted RBP24.12■■□□□ 1.45
MSX1-201ENST00000382723 CORINQ9Y5Q5 1042 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 KDM4EB2RXH2 506 aaPredicted RBP24.12■■□□□ 1.45
MSX1-201ENST00000382723 AKR7A3O95154 331 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 PLGP00747 810 aaPredicted RBP24.12■■□□□ 1.45
MSX1-201ENST00000382723 IFNGP01579 166 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 ZNF91Q05481 1191 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 CRMP1Q14194 572 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 IGFL2Q6UWQ7 119 aa24.12■■□□□ 1.45
MSX1-201ENST00000382723 KDM8Q8N371 416 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms