RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ECH1Q13011 328 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 TEAD2Q15562 447 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 POM121L1PQ3SYA9 428 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 GDPD4Q6W3E5 623 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 MAMSTRQ6ZN01 415 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 Q6ZNB5 142 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 USP53Q70EK8 1073 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 PGAP1Q75T13 922 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 OR51A7Q8NH64 312 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 ELP5Q8TE02 316 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 RAB40AQ8WXH6 277 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 DVL3Q92997 716 aaPredicted RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 OTUB2Q96DC9 234 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 CPEB1Q9BZB8 566 aaKnown RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 POFUT1Q9H488 388 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 TNFSF18Q9UNG2 199 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 SLC35A3Q9Y2D2 325 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 CARHSP1Q9Y2V2 147 aaKnown RBP13.76□□□□□ -0.21
CTNS-202ENST00000381870 SLC22A7Q9Y694 548 aa13.76□□□□□ -0.21
CTNS-202ENST00000381870 CENPVL1A0A0U1RR11 272 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 RNF222A6NCQ9 220 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 TTLL8A6PVC2 850 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 EFCAB7A8K855 629 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 H7BY64 318 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 PSMD9O00233 223 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 GLSO94925 669 aaPredicted RBP13.75□□□□□ -0.21
CTNS-202ENST00000381870 AGTR1P30556 359 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 PRKAR1BP31321 381 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 GPR143P51810 404 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 TAF13Q15543 124 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 GLT8D1Q68CQ7 371 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 KRT77Q7Z794 578 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 TRAPPC5Q8IUR0 188 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 OR8S1Q8NH09 359 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 SNX33Q8WV41 574 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 MIB2Q96AX9 1013 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 CNRIP1Q96F85 164 aaPredicted RBP13.75□□□□□ -0.21
CTNS-202ENST00000381870 PRAP1Q96NZ9 151 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 ZNF334Q9HCZ1 680 aaPredicted RBP13.75□□□□□ -0.21
CTNS-202ENST00000381870 KRCC1Q9NPI7 259 aaPredicted RBP13.75□□□□□ -0.21
CTNS-202ENST00000381870 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 H7C417 338 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 H7C4K7 107 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 FADS1O60427 444 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 POP7O75817 140 aaKnown RBP13.75□□□□□ -0.21
CTNS-202ENST00000381870 OLFM2O95897 454 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 S100A8P05109 93 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 HTR2AP28223 471 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 C9orf64Q5T6V5 341 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 RPL22L1Q6P5R6 122 aaKnown RBP13.75□□□□□ -0.21
CTNS-202ENST00000381870 CORO6Q6QEF8 472 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 UNQ6126/PRO20091Q6UXV3 157 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 ZNF793Q6ZN11 406 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 TMEM150AQ86TG1 271 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 STEAP2Q8NFT2 490 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 PAQR8Q8TEZ7 354 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 OR51M1Q9H341 326 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 C2orf42Q9NWW7 574 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 MBD2Q9UBB5 411 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 MTFP1Q9UDX5 166 aa13.75□□□□□ -0.21
CTNS-202ENST00000381870 GTF2F2P13984 249 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 MC3RP41968 323 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 ST8SIA6P61647 398 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 POLR2LP62875 67 aaKnown RBP13.74□□□□□ -0.21
CTNS-202ENST00000381870 LCTLQ6UWM7 567 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 DNM1P46Q6ZS02 220 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 C17orf64Q86WR6 236 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 OR5AR1Q8NGP9 310 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 OR4C6Q8NH72 309 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 PHYHIPLQ96FC7 376 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 MACROD1Q9BQ69 325 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 ZNF443Q9Y2A4 671 aaPredicted RBP13.74□□□□□ -0.21
CTNS-202ENST00000381870 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 COLCA2A8K830 154 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 CCSO14618 274 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 KCNAB3O43448 404 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 IGHV2-70P01814 119 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 GKN3PP0CG01 181 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 F3P13726 295 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 DLSTP36957 453 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 SSR2P43308 183 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 ARFIP1P53367 373 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 RAB5BP61020 215 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 TAF1CQ15572 869 aaPredicted RBP13.74□□□□□ -0.21
CTNS-202ENST00000381870 PRAMEF8Q5VWM4 474 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 PRAMEF7Q5VXH5 474 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 OR4C11Q6IEV9 310 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 CMTM8Q8IZV2 173 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 NUP43Q8NFH3 380 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 TMEM239Q8WW34 195 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 RGP1Q92546 391 aaPredicted RBP13.74□□□□□ -0.21
CTNS-202ENST00000381870 SEC22AQ96IW7 307 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 ARL5BQ96KC2 179 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 AICDAQ9GZX7 198 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 TSPAN10Q9H1Z9 355 aaPredicted RBP13.74□□□□□ -0.21
CTNS-202ENST00000381870 TREM1Q9NP99 234 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 CXXC1Q9P0U4 656 aaPredicted RBP13.74□□□□□ -0.21
CTNS-202ENST00000381870 GHRLQ9UBU3 117 aa13.74□□□□□ -0.21
CTNS-202ENST00000381870 SIGLEC7Q9Y286 467 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms