RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 MAGEB1P43366 347 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 GPR18Q14330 331 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 SLC22A6Q4U2R8 563 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 TMEM41BQ5BJD5 291 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 HENMT1Q5T8I9 393 aaKnown RBP13.01□□□□□ -0.33
SNPH-201ENST00000381867 ADAMTSL4Q6UY14 1074 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 OR9A4Q8NGU2 314 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 PCNPQ8WW12 178 aaKnown RBP13.01□□□□□ -0.33
SNPH-201ENST00000381867 ASB16Q96NS5 453 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 SEMA4GQ9NTN9 838 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 KCMF1Q9P0J7 381 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 PLEKHM1Q9Y4G2 1056 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNPH-201ENST00000381867 A3GALT2U3KPV4 340 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 GASTP01350 101 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 TCRBP04435 133 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 CD38P28907 300 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 SERPINF1P36955 418 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 TPMTP51580 245 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
SNPH-201ENST00000381867 SLC51BQ86UW2 128 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 HRASLS5Q96KN8 279 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 OR7D2Q96RA2 312 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 ACTL7AQ9Y615 435 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 TRBV4-1A0A0J9YWV2 114 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 NUDT21O43809 227 aaKnown RBP13.01□□□□□ -0.33
SNPH-201ENST00000381867 GNB3P16520 340 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 OR1Q1Q15612 314 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 LEXMQ3ZCV2 418 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
SNPH-201ENST00000381867 VRK2Q86Y07 508 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 CCDC71Q8IV32 467 aaPredicted RBP13.01□□□□□ -0.33
SNPH-201ENST00000381867 BTBD2Q9BX70 525 aa13.01□□□□□ -0.33
SNPH-201ENST00000381867 GOLGA4Q13439 2230 aaKnown RBP13□□□□□ -0.33
SNPH-201ENST00000381867 AIPO00170 330 aa13□□□□□ -0.33
SNPH-201ENST00000381867 APEX1P27695 318 aaKnown RBP13□□□□□ -0.33
SNPH-201ENST00000381867 HTR4Q13639 388 aa13□□□□□ -0.33
SNPH-201ENST00000381867 SFXN4Q6P4A7 337 aa13□□□□□ -0.33
SNPH-201ENST00000381867 PRR18Q8N4B5 295 aa13□□□□□ -0.33
SNPH-201ENST00000381867 ZNF808Q8N4W9 903 aaPredicted RBP13□□□□□ -0.33
SNPH-201ENST00000381867 GALNT9Q9HCQ5 603 aa13□□□□□ -0.33
SNPH-201ENST00000381867 NRIP3Q9NQ35 241 aa13□□□□□ -0.33
SNPH-201ENST00000381867 CXXC1Q9P0U4 656 aaPredicted RBP13□□□□□ -0.33
SNPH-201ENST00000381867 POLHQ9Y253 713 aa13□□□□□ -0.33
SNPH-201ENST00000381867 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
SNPH-201ENST00000381867 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
SNPH-201ENST00000381867 DBPQ10586 325 aaPredicted RBP13□□□□□ -0.33
SNPH-201ENST00000381867 YIF1BQ5BJH7 314 aa13□□□□□ -0.33
SNPH-201ENST00000381867 SYT6Q5T7P8 510 aaPredicted RBP13□□□□□ -0.33
SNPH-201ENST00000381867 KCTD11Q693B1 232 aa13□□□□□ -0.33
SNPH-201ENST00000381867 FAM122BQ7Z309 247 aa13□□□□□ -0.33
SNPH-201ENST00000381867 KHSRPQ92945 711 aaKnown RBP eCLIP13□□□□□ -0.33
SNPH-201ENST00000381867 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
SNPH-201ENST00000381867 PRSS16Q9NQE7 514 aa13□□□□□ -0.33
SNPH-201ENST00000381867 S100A11P31949 105 aa13□□□□□ -0.33
SNPH-201ENST00000381867 OR2T11Q8NH01 316 aa13□□□□□ -0.33
SNPH-201ENST00000381867 OR4K15Q8NH41 348 aa13□□□□□ -0.33
SNPH-201ENST00000381867 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
SNPH-201ENST00000381867 GCDHQ92947 438 aaPredicted RBP13□□□□□ -0.33
SNPH-201ENST00000381867 CCNL2Q96S94 520 aaPredicted RBP13□□□□□ -0.33
SNPH-201ENST00000381867 CRB3Q9BUF7 120 aa13□□□□□ -0.33
SNPH-201ENST00000381867 CRISPLD2Q9H0B8 497 aa13□□□□□ -0.33
SNPH-201ENST00000381867 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
SNPH-201ENST00000381867 DIMT1Q9UNQ2 313 aaKnown RBP13□□□□□ -0.33
SNPH-201ENST00000381867 PRSS38A1L453 326 aa13□□□□□ -0.33
SNPH-201ENST00000381867 ATP6V1G2-DDX39BF2Z307 99 aa13□□□□□ -0.33
SNPH-201ENST00000381867 HBE1P02100 147 aa13□□□□□ -0.33
SNPH-201ENST00000381867 MPEG1Q2M385 716 aa13□□□□□ -0.33
SNPH-201ENST00000381867 EXOSC6Q5RKV6 272 aaKnown RBP13□□□□□ -0.33
SNPH-201ENST00000381867 LINC00299Q6ZSB3 139 aa13□□□□□ -0.33
SNPH-201ENST00000381867 SLC30A7Q8NEW0 376 aa13□□□□□ -0.33
SNPH-201ENST00000381867 OR8J2Q8NGG1 315 aa13□□□□□ -0.33
SNPH-201ENST00000381867 CPT1CQ8TCG5 803 aa13□□□□□ -0.33
SNPH-201ENST00000381867 EGLN2Q96KS0 407 aa13□□□□□ -0.33
SNPH-201ENST00000381867 HCAR1Q9BXC0 346 aa13□□□□□ -0.33
SNPH-201ENST00000381867 CDH20Q9HBT6 801 aa13□□□□□ -0.33
SNPH-201ENST00000381867 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
SNPH-201ENST00000381867 B4DXG7 233 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 EFNA3P52797 238 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 SEC61A1P61619 476 aaKnown RBP12.99□□□□□ -0.33
SNPH-201ENST00000381867 MFGE8Q08431 387 aaPredicted RBP12.99□□□□□ -0.33
SNPH-201ENST00000381867 SLC5A12Q1EHB4 618 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 RBMXL1Q96E39 390 aaKnown RBP12.99□□□□□ -0.33
SNPH-201ENST00000381867 ZNF583Q96ND8 569 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 ELOVL3Q9HB03 270 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 USP22Q9UPT9 525 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 D6RAR5 112 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 ACOT8O14734 319 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 SLC16A6O15403 523 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 SLC16A7O60669 478 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 LALBAP00709 142 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 C1SP09871 688 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
SNPH-201ENST00000381867 OPRD1P41143 372 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 SYPL1Q16563 259 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 TMEM200AQ86VY9 491 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 TMEM269A0A1B0GVZ9 245 aa12.99□□□□□ -0.33
SNPH-201ENST00000381867 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms