RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SLAMF1Q13291 335 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ARFRP1Q13795 201 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PRRT3Q5FWE3 981 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CXorf57Q6NSI4 855 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SCIMPQ6UWF3 145 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ARRDC1Q8N5I2 433 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MAFAQ8NHW3 353 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DDIT4LQ96D03 193 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SFXN2Q96NB2 322 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RXFP3Q9NSD7 469 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF391Q9UJN7 358 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RBMX2Q9Y388 322 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 FRMPD3Q5JV73 1810 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DIRAS3O95661 229 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SLURP2P0DP57 97 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OTX2P32243 289 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 IDH3GP51553 393 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 S100A10P60903 97 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MSMO1Q15800 293 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ERN2Q76MJ5 926 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 COMMD6Q7Z4G1 85 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SERPINA9Q86WD7 417 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CMTM1Q8IZ96 169 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OR5R1Q8NH85 324 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ISG20Q96AZ6 181 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DPH2Q9BQC3 489 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 TPSD1Q9BZJ3 242 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 NTN4Q9HB63 628 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 TREM2Q9NZC2 230 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 IL37Q9NZH6 218 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 IL20RAQ9UHF4 553 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PCDHGA5Q9Y5G8 931 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 WTIPA6NIX2 430 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ELOA3DA6NLF2 546 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 IQCF5A8MTL0 148 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF354AO60765 605 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TCRBP04435 133 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CTXN2P0C2S0 81 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 HAPLN1P10915 354 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NAGAP17050 411 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC6A1P30531 599 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RPS21P63220 83 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PDE7AQ13946 482 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ELOA3BQ3SY89 546 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CHRFAM7AQ494W8 412 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 C6orf132Q5T0Z8 1188 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 KIAA0895LQ68EN5 471 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC18B1Q6NT16 456 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GOLGA7Q7Z5G4 137 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF100Q8IYN0 542 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ELOA3Q8NG57 546 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 XAGE5Q8WWM1 108 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 FAM117AQ9C073 453 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TUBA4BQ9H853 241 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TXNRD2Q9NNW7 524 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 YTHDF2Q9Y5A9 579 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PCDHGC4Q9Y5F7 938 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 C2orf72A6NCS6 295 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PRAMEF11O60813 436 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SEMA4FO95754 770 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GP1BAP07359 652 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RIDAP52758 137 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 MRPL49Q13405 166 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ATPAF1Q5TC12 328 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NPNTQ6UXI9 565 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ADGRE4PQ86SQ3 457 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF808Q8N4W9 903 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 KTI12Q96EK9 354 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TSSK2Q96PF2 358 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RANGRFQ9HD47 186 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 FBXL3Q9UKT7 428 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 KCNK6Q9Y257 313 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF281Q9Y2X9 895 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 PLXNA3P51805 1871 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 RNGTTO60942 597 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ANXA7P20073 488 aaKnown RBP4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TUBG1P23258 451 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 NTSR1P30989 418 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 FOLR3P41439 243 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SLC6A9P48067 706 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GATMP50440 423 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ARF6P62330 175 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ACVR1Q04771 509 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 BAXQ07812 192 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 OR8G1Q15617 311 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ISXQ2M1V0 245 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ABHD17BQ5VST6 288 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM107Q6UX40 140 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 SGPP2Q8IWX5 399 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 TDHQ8IZJ6 230 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 CMTM8Q8IZV2 173 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ARHGEF39Q8N4T4 335 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 C1orf127Q8N9H9 656 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GLIS3Q8NEA6 775 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 OR6M1Q8NGM8 313 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 OR6N1Q8NGY5 312 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 ABHD5Q8WTS1 349 aa4.55□□□□□ -1.68
PTPRD-203ENST00000381196 GPR21Q99679 349 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms