RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ZNF501Q96CX3 271 aaPredicted RBP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 ZC3HAV1LQ96H79 300 aaKnown RBP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 GAL3ST4Q96RP7 486 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 NXF5Q9H1B4 397 aaKnown RBP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 MED20Q9H944 212 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 MRPS18AQ9NVS2 196 aaKnown RBP13.06□□□□□ -0.32
CLCN4-201ENST00000380829 SEC14L4Q9UDX3 406 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 SERTAD3Q9UJW9 196 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 SSR3Q9UNL2 185 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 SIGLEC7Q9Y286 467 aa13.06□□□□□ -0.32
CLCN4-201ENST00000380829 A0A0A6YYJ9 748 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 BHLHE40O14503 412 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 HMGN1P05114 100 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 SYPP08247 313 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 RRASP10301 218 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 EPHA8P29322 1005 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 GALNSP34059 522 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 GRK1Q15835 563 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 PLBD1Q6P4A8 553 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 QSOX2Q6ZRP7 698 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF550Q7Z398 422 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 LHFPL3Q86UP9 236 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 PRR22Q8IZ63 422 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 OR11H7Q8NGC8 314 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 GATAD2BQ8WXI9 593 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 RBPMSQ93062 196 aaKnown RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 WACQ9BTA9 647 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 FGF20Q9NP95 211 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 NDUFB11Q9NX14 153 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 SEMA5BQ9P283 1151 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 TNFRSF10DQ9UBN6 386 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 PI4KAP42356 2102 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 HPGDSO60760 199 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 SLC43A1O75387 559 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF81P51508 661 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 PSMD4P55036 377 aaKnown RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 CTBP2P56545 445 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 CRYZQ08257 329 aaKnown RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 MLLT11Q13015 90 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 NSDHLQ15738 373 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 BCL2L15Q5TBC7 163 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF574Q6ZN55 896 aaPredicted RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 SHISA6Q6ZSJ9 500 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 TRILQ7L0X0 811 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 CXXC5Q7LFL8 322 aaKnown RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 RFKQ969G6 155 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF426Q9BUY5 554 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF768Q9H5H4 540 aaKnown RBP13.05□□□□□ -0.32
CLCN4-201ENST00000380829 MED17Q9NVC6 651 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 RDH8Q9NYR8 311 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 RPS6KB2Q9UBS0 482 aa13.05□□□□□ -0.32
CLCN4-201ENST00000380829 A0A1B0GX78 115 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 A0A1W2PRG6 482 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 CDC14CA4D256 554 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 DDAH2O95865 285 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 HRGP04196 525 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 WNT4P56705 351 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
CLCN4-201ENST00000380829 CD226Q15762 336 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 PMS2CLQ68D20 193 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF57Q68EA5 555 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-201ENST00000380829 OAFQ86UD1 273 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 ZNF721Q8TF20 911 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 TM9SF4Q92544 642 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 RBP7Q96R05 134 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 H2AFY2Q9P0M6 372 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-201ENST00000380829 CTSFQ9UBX1 484 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 ING4Q9UNL4 249 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 SPIN1Q9Y657 262 aaPredicted RBP13.04□□□□□ -0.32
CLCN4-201ENST00000380829 HEATR5AQ86XA9 2040 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 HCN1O60741 890 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 RCBTB2O95199 551 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 LIMS3P0CW19 117 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 LIMS4P0CW20 117 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 RORAP35398 523 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 ATP6V1E1P36543 226 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 INPP1P49441 399 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 BIKQ13323 160 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 CLLU1Q5K131 121 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 ULK3Q6PHR2 472 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 LNX2Q8N448 690 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 PIGKQ92643 395 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 SLC46A1Q96NT5 459 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 TNFRSF13CQ96RJ3 184 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 NUDT9Q9BW91 350 aa13.04□□□□□ -0.32
CLCN4-201ENST00000380829 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms