RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SDK2Q58EX2 2172 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 C4orf47A7E2U8 309 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 CLDN25C9JDP6 229 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 GALR2O43603 387 aaPredicted RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 AKAP8O43823 692 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 SERPINI2O75830 405 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 DKK1O94907 266 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 APEHP13798 732 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 PRKCAP17252 672 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 PTGDSP41222 190 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 CDKN2AP42771 156 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 HTR3AP46098 478 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 POU4F2Q12837 409 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 EXT1Q16394 746 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 NTRK2Q16620 822 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 KLBQ86Z14 1044 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 CROCCP3Q8IVE0 287 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNRF4Q8WWF5 429 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 SPACA9Q96E40 222 aaPredicted RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 C1GALT1C1Q96EU7 318 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 TM9SF2Q99805 663 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 NMNAT2Q9BZQ4 307 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 AKIP1Q9NQ31 210 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 INPP5EQ9NRR6 644 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 TXNL4BQ9NX01 149 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 PISDQ9UG56 409 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 SLC6A5Q9Y345 797 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 PCDHGB6Q9Y5F9 930 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 CACNA1HO95180 2353 aa17.99■□□□□ 0.47
PDLIM5-205ENST00000380180 CELP19835 753 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 SDHAP31040 664 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 E2F1Q01094 437 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 PON3Q15166 354 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 C1orf140Q5VVS0 124 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 LEG1Q6P5S2 330 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 OR11G2Q8NGC1 345 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 ST8SIA1Q92185 356 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 OR11A1Q9GZK7 315 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 NXF2Q9GZY0 626 aaKnown RBP17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 METTL7AQ9H8H3 244 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 TAS2R5Q9NYW4 299 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 HRH3Q9Y5N1 445 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF670-ZNF695F2Z2N8 137 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 ITGA10O75578 1167 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 MT-ATP6P00846 226 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 GABRA5P31644 462 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 IDUAP35475 653 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 RPS19P39019 145 aaKnown RBP17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 SUMO3P55854 103 aaPredicted RBP17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 LGALS3BPQ08380 585 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 FAM69AQ5T7M9 428 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 ARSKQ6UWY0 536 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 MAMDC2Q7Z304 686 aaPredicted RBP17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 LSM14AQ8ND56 463 aaKnown RBP17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 M1APQ8TC57 530 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 RELTQ969Z4 430 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 TAAR9Q96RI9 348 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 HMG20AQ9NP66 347 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 BABAM2Q9NXR7 383 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 PPP4R1LQ9P1A2 415 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 GRHPRQ9UBQ7 328 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 VDAC3Q9Y277 283 aa17.98■□□□□ 0.47
PDLIM5-205ENST00000380180 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 A0A1W2PQL4 384 aaPredicted RBP17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 SLC30A4O14863 429 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 SPI1P17947 270 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 DIO1P49895 249 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF85Q03923 595 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF846Q147U1 533 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 CRTC2Q53ET0 693 aaPredicted RBP17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 C6orf15Q6UXA7 325 aaPredicted RBP17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 TIPARPQ7Z3E1 657 aaKnown RBP17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 JAZF1Q86VZ6 243 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 S100ZQ8WXG8 99 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 ZPBPQ9BS86 351 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 EDEM2Q9BV94 578 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 C6orf62Q9GZU0 229 aaPredicted RBP17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 A3GALT2U3KPV4 340 aa17.97■□□□□ 0.47
PDLIM5-205ENST00000380180 TXNDC12O95881 172 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 JMJD7P0C870 316 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 TCN2P20062 427 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 SOX6P35712 828 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 CASP3P42574 277 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 HCCSP53701 268 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 GGTLC2Q14390 218 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 C22orf42Q6IC83 251 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 ATP6V1C2Q8NEY4 427 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 STK35Q8TDR2 534 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 TSPAN32Q96QS1 320 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 TMEM9BQ9NQ34 198 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 SDHAF3Q9NRP4 125 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 WIF1Q9Y5W5 379 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 ZNF318Q5VUA4 2279 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 TFP02787 698 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 BMP4P12644 408 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 RPS18P62269 152 aaKnown RBP17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 ACTC1P68032 377 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 ACTA1P68133 377 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 FABP5Q01469 135 aa17.96■□□□□ 0.47
PDLIM5-205ENST00000380180 SLC35D3Q5M8T2 416 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms