RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 MECP2P51608 486 aaKnown RBP12.6□□□□□ -0.39
C9orf47-203ENST00000375851 CXADRP78310 365 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 FAM69AQ5T7M9 428 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 LRRC69Q6ZNQ3 347 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 CMIPQ8IY22 773 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 OR7G2Q8NG99 324 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 FOXRED1Q96CU9 486 aaPredicted RBP12.6□□□□□ -0.39
C9orf47-203ENST00000375851 DNTTIP1Q9H147 329 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 OR51J1Q9H342 316 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 KCNIP1Q9NZI2 227 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 TMPRSS11EQ9UL52 423 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
C9orf47-203ENST00000375851 CXorf51AA0A1B0GTR3 108 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 PLRG1O43660 514 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 JUNBP17275 347 aaPredicted RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 APLNRP35414 380 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CAMK2DQ13557 499 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 ELAVL1Q15717 326 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 ZNF566Q969W8 418 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 TMEM106AQ96A25 262 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CHST8Q9H2A9 424 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 PADI1Q9ULC6 663 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CABIN1Q9Y6J0 2220 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 PRAF2O60831 178 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CSO75390 466 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 SNRPBP14678 240 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 FXYD4P59646 89 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 SLC35A2P78381 396 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 LTBQ06643 244 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 NKAIN1Q4KMZ8 207 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 ANKRD34AQ69YU3 496 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 OR1J4Q8NGS1 313 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 RAB40AQ8WXH6 277 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 Q96M85 177 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 C1orf198Q9H425 327 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 REV1Q9UBZ9 1251 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 LOC102725191A0A1B0GVB3 256 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 SLC33A1O00400 549 aaPredicted RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 TFP02787 698 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 DCNP07585 359 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 AKR1C2P52895 323 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CLDN12P56749 244 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 NDUFAF7Q7L592 441 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 MARCH3Q86UD3 253 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 LAX1Q8IWV1 398 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 FBXL6Q8N531 539 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 FRMD1Q8N878 549 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 ABHD4Q8TB40 342 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 PHB2Q99623 299 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 C7orf50Q9BRJ6 194 aaKnown RBP12.59□□□□□ -0.39
C9orf47-203ENST00000375851 DPP4P27487 766 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 SSR4P51571 173 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CCR5P51681 352 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 EPHA4P54764 986 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 KCNAB1Q14722 419 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 C3P1Q6ZMU1 363 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 CLDN22Q8N7P3 220 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 TEX101Q9BY14 249 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
C9orf47-203ENST00000375851 IGHV3-20A0A0C4DH32 117 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 HLA-DMAP28067 261 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 AGAP6Q5VW22 663 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 DEDD2Q8WXF8 326 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 RRNAD1Q96FB5 475 aaKnown RBP12.58□□□□□ -0.4
C9orf47-203ENST00000375851 AGAP4Q96P64 663 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 MAN2C1Q9NTJ4 1040 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 NDRG4Q9ULP0 352 aaKnown RBP12.58□□□□□ -0.4
C9orf47-203ENST00000375851 TCRBV5S2A0A599 114 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 PCP4L1A6NKN8 68 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 GOSR2O14653 212 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 ARPC5O15511 151 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 FZD7O75084 574 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 ALOX12BO75342 701 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 SRFP11831 508 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 MELKQ14680 651 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 HBMQ6B0K9 141 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 TCTN3Q6NUS6 607 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 NRARPQ7Z6K4 114 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
C9orf47-203ENST00000375851 ALG14Q96F25 216 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 OR2A25A4D2G3 310 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 A8MVM7 634 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 MRPL33O75394 65 aaKnown RBP12.58□□□□□ -0.4
C9orf47-203ENST00000375851 PCSK6P29122 969 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 CLDN17P56750 224 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 PPA1Q15181 289 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 ADPRMQ3LIE5 342 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 PTOV1Q86YD1 416 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 SPNS1Q9H2V7 528 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 RCE1Q9Y256 329 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 CROCCQ5TZA2 2017 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 A0A1W2PPC4 97 aa12.58□□□□□ -0.4
C9orf47-203ENST00000375851 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms