RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PARPBPQ9NWS1 579 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 CKAP5Q14008 2032 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 H0YIG0 161 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 BOLA2-SMG1P6H3BVE0 249 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF701M0R085 212 aaPredicted RBP16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 BCKDHBP21953 392 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 RPS27P42677 84 aaKnown RBP16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 PSMA6P60900 246 aaKnown RBP16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 SYT14P1Q58G82 188 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 FAM205BPQ63HN1 556 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 PAQR6Q6TCH4 344 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF565Q8N9K5 539 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 SLC41A2Q96JW4 573 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 CCDC74BQ96LY2 380 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 HHLA2Q9UM44 414 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 CDHR4A6H8M9 788 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 AKR7A3O95154 331 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 ZGLP1P0C6A0 271 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 CCL11P51671 97 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 NKPD1Q17RQ9 610 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 TMEM71Q6P5X7 295 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF704Q6ZNC4 412 aaPredicted RBP16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 OR52I1Q8NGK6 324 aa16.53■□□□□ 0.24
PTPDC1-202ENST00000375360 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 SHISA7A6NL88 538 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 A8MVM7 634 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 DISC1C4P0D8 188 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 RLN2P04090 185 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 CD3GP09693 182 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 EPHA4P54764 986 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 TMEM201Q5SNT2 666 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 BORAQ6PGQ7 559 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 ZBTB8BQ8NAP8 495 aaPredicted RBP16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 GPBAR1Q8TDU6 330 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 ASB12Q8WXK4 309 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 SPTSSAQ969W0 71 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 NTN4Q9HB63 628 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 HINT3Q9NQE9 182 aaKnown RBP16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 PCDHB16Q9NRJ7 776 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 A0A1B0GVG6 124 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 PRAMEF25A6NGN4 478 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 DUSP8Q13202 625 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 C1orf140Q5VVS0 124 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 PM20D2Q8IYS1 436 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 POGLUT1Q8NBL1 392 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 ZNF566Q969W8 418 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 BCL2L10Q9HD36 194 aa16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 NDRG4Q9ULP0 352 aaKnown RBP16.52■□□□□ 0.24
PTPDC1-202ENST00000375360 ISPDA4D126 451 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 LILRA5A6NI73 299 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 ICOSLGO75144 302 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 CD46P15529 392 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 NPR2P20594 1047 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 SHC1P29353 583 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 PTH2RP49190 550 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 HERV-K104P61576 105 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 FAM69AQ5T7M9 428 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 SMAP2Q8WU79 429 aaPredicted RBP16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 CAMK2AQ9UQM7 478 aa16.52■□□□□ 0.23
PTPDC1-202ENST00000375360 THBS1P07996 1170 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 S100A10P60903 97 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 CHRFAM7AQ494W8 412 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 NIPAL3Q6P499 406 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 FTMTQ8N4E7 242 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 CADM4Q8NFZ8 388 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF417Q8TAU3 575 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 HAVCR1Q96D42 359 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 OR10A4Q9H209 315 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 KLHL13Q9P2N7 655 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 MAGEB4O15481 346 aaPredicted RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 MRPL33O75394 65 aaKnown RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 MTRF1O75570 445 aaKnown RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 HTR3BO95264 441 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 DDAH2O95865 285 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 IGHV3-9P01782 118 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 SLC35A2P78381 396 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 SLC22A6Q4U2R8 563 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 RNASE10Q5GAN6 216 aaKnown RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 OR8H3Q8N146 312 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 TSSK2Q96PF2 358 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 MED17Q9NVC6 651 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 A0A1W2PNR3 127 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 MEGF11A6BM72 1044 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 M0R082 166 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 FOLR1P15328 257 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 HCCSP53701 268 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 SIRPAP78324 504 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 THOC7Q6I9Y2 204 aaKnown RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 OR4C3Q8NH37 302 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 ZNF587Q96SQ5 575 aaPredicted RBP16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 BCL7BQ9BQE9 202 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 POTEKPQ9BYX7 375 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 SEMA4CQ9C0C4 833 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 POLE3Q9NRF9 147 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 SLC6A5Q9Y345 797 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 A0A1W2PS29 197 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 RAD51DO75771 328 aa16.51■□□□□ 0.23
PTPDC1-202ENST00000375360 IFNA21P01568 189 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms