RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 IL20RBQ6UXL0 311 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 UNQ9370/PRO34162Q6UXP9 181 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 SSX6Q7RTT6 188 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 BCORP1Q8N888 145 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 C7orf57Q8NEG2 295 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 LIPHQ8WWY8 451 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 NMNAT2Q9BZQ4 307 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 OR10A5Q9H207 317 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 ABCG5Q9H222 651 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 LRRN3Q9H3W5 708 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 EXOSC3Q9NQT5 275 aaKnown RBP12.76□□□□□ -0.37
HMGCL-203ENST00000374490 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 SPATA2Q9UM82 520 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 PLCL2Q9UPR0 1127 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 MOKQ9UQ07 419 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 CAMK2AQ9UQM7 478 aa12.76□□□□□ -0.37
HMGCL-203ENST00000374490 SCN3AQ9NY46 2000 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 LILRA5A6NI73 299 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 METTL12A8MUP2 240 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 B4DGG1 531 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 TGFBR3LH3BV60 316 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 EEF1E1O43324 174 aaKnown RBP12.75□□□□□ -0.37
HMGCL-203ENST00000374490 FOXS1O43638 330 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 GYPBP06028 91 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 CT45A8P0DMV1 189 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 CT45A9P0DMV2 189 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 EPXP11678 715 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 SPI1P17947 270 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 EDNRAP25101 427 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 GRK6P43250 576 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 RAG2P55895 527 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 RPL6Q02878 288 aaKnown RBP12.75□□□□□ -0.37
HMGCL-203ENST00000374490 LPAL2Q16609 132 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 NTRK2Q16620 822 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 SLC25A35Q3KQZ1 300 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 CT45A2Q5DJT8 189 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 TCTE1Q5JU00 501 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 RPTNQ6XPR3 784 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 NUP54Q7Z3B4 507 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 GLCCI1Q86VQ1 547 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 NPEPL1Q8NDH3 523 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 FAM71CQ8NEG0 241 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 CADM4Q8NFZ8 388 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 C16orf52Q8NHV5 167 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 RPS4Y2Q8TD47 263 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 ADAMTS14Q8WXS8 1223 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 C3orf49Q96BT1 292 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 DDOQ99489 341 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 RBCK1Q9BYM8 510 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.75□□□□□ -0.37
HMGCL-203ENST00000374490 ACOXLQ9NUZ1 547 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 PTTG3PQ9NZH4 202 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 AKAP7Q9P0M2 348 aaPredicted RBP12.75□□□□□ -0.37
HMGCL-203ENST00000374490 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 MAU2Q9Y6X3 613 aa12.75□□□□□ -0.37
HMGCL-203ENST00000374490 TRBV2A0A0J9YWF9 115 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 C7orf66A4D0T2 115 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ELOA3DA6NLF2 546 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-203ENST00000374490 HCRTR1O43613 425 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 LRP3O75074 770 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ITGA10O75578 1167 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 GLCEO94923 617 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 PAHP00439 452 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 CD38P28907 300 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 LCN1P31025 176 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 CAPZBP47756 277 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 SPEM2Q0P670 501 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ELOA3BQ3SY89 546 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 KLHL26Q53HC5 615 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF542PQ5EBM4 170 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 UBE2NLQ5JXB2 153 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 KCTD20Q7Z5Y7 419 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 JAZF1Q86VZ6 243 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF761Q86XN6 746 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-203ENST00000374490 SLC35F3Q8IY50 421 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 DEFB119Q8N690 84 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ELOA3Q8NG57 546 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 HYLS1Q96M11 299 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 HSPA12BQ96MM6 686 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 ORAI3Q9BRQ5 295 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 BEX2Q9BXY8 128 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 C12orf10Q9HB07 376 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 MCUBQ9NWR8 336 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 STMN3Q9NZ72 180 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 LRIT1Q9P2V4 623 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 EPHA6Q9UF33 1036 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 GNG8Q9UK08 70 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
HMGCL-203ENST00000374490 CACNA1IQ9P0X4 2223 aa12.74□□□□□ -0.37
HMGCL-203ENST00000374490 H0YIG0 161 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 PROS1P07225 676 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 NAA10P41227 235 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-203ENST00000374490 FASLGP48023 281 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 AGFG1P52594 562 aaKnown RBP12.73□□□□□ -0.37
HMGCL-203ENST00000374490 DYRK1AQ13627 763 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 EMC4Q5J8M3 183 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms