RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ETV3LQ6ZN32 361 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 BPIFCQ8NFQ6 507 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF845Q96IR2 970 aaPredicted RBP12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 WFIKKN1Q96NZ8 548 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 C1GALT1Q9NS00 363 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 NENFQ9UMX5 172 aa12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 UBE2J1Q9Y385 318 aaPredicted RBP12.4□□□□□ -0.43
RAPGEF1-201ENST00000372189 GGT3PA6NGU5 568 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 TNFRSF10CO14798 259 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 MMP2P08253 660 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 ABOP16442 354 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 OR1D5P58170 312 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 NKX3-2P78367 333 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 CPOQ8IVL8 374 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 OR13C2Q8NGS9 318 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 BLNKQ8WV28 456 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 TOR1AO14656 332 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 USF1P22415 310 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 DIO1P49895 249 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 PRPS1P60891 318 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 ABHD12BQ7Z5M8 362 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 SPRED1Q7Z699 444 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 TMEM185AQ8NFB2 350 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 FER1L6-AS2Q96M78 137 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 ADAM19Q9H013 955 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 GABRR3A8MPY1 467 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 SULT2B1O00204 365 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 TCN2P20062 427 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 PATZ1Q9HBE1 687 aaKnown RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 APMAPQ9HDC9 416 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 ADAM29Q9UKF5 820 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 HMGN2P05204 90 aaKnown RBP12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 CPOXP36551 454 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 ARL6IP1Q15041 203 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 AGAP7PQ5VUJ5 663 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 OR5D16Q8NGK9 328 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 LKAAEAR1Q8TD35 194 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 GGHQ92820 318 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 SYT3Q9BQG1 590 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 BTBD2Q9BX70 525 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 DNTTIP1Q9H147 329 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 PTTG3PQ9NZH4 202 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 KCND3Q9UK17 655 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 LAMA4Q16363 1823 aa12.39□□□□□ -0.43
RAPGEF1-201ENST00000372189 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 DAP3P51398 398 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 ADOQ96SZ5 270 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 MBNL1Q9NR56 388 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 H3BUI4 141 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 M0R3H8 397 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 AKR7A3O95154 331 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 RPS19P39019 145 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 HYAL1Q12794 435 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 ADPRHL1Q8NDY3 354 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 GTF2H4Q92759 462 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 ATOH8Q96SQ7 321 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 AGAP14A8MT82 685 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 NDUFB2O95178 105 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 CBR1P16152 277 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 SEMA3BQ13214 749 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TMPRSS7Q7RTY8 843 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 LRRC28Q86X40 367 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 BOLLQ8N9W6 283 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 ZNF417Q8TAU3 575 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 LMF1Q96S06 567 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 UTP23Q9BRU9 249 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TXNL4BQ9NX01 149 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 LOC102723532A0A0G2JNH3 316 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 PIN1Q13526 163 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TATDN3Q17R31 274 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 FAM205BPQ63HN1 556 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 IL20RBQ6UXL0 311 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 CBLL1Q75N03 491 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 PDXPQ96GD0 296 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 CTRCQ99895 268 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 FGF21Q9NSA1 209 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 ARAP2Q8WZ64 1704 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 C7orf72A4D263 438 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 ALPLP05186 524 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 RAB6AP20340 208 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 SULT1A2P50226 295 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 CCR5P51681 352 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 GPLD1P80108 840 aa12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 RPL24P83731 157 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-201ENST00000372189 TP53I3Q53FA7 332 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms