RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 G3V3Y1 287 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 INMTO95050 263 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 IRF3Q14653 427 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 UBE2UQ5VVX9 321 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 OR52E2Q8NGJ4 325 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 CORINQ9Y5Q5 1042 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 EML6Q6ZMW3 1958 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 SHISA8B8ZZ34 492 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 IMPA2O14732 288 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 HIST1H1CP16403 213 aaKnown RBP23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 ACVR2AP27037 513 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 CD96P40200 585 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 CTXN1P60606 82 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 ERVK-25P63136 954 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 SYT6Q5T7P8 510 aaPredicted RBP23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 RNLSQ5VYX0 342 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 SLC6A19Q695T7 634 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 ZNF227Q86WZ6 799 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 GALNT16Q8N428 558 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 FAM98AQ8NCA5 519 aaKnown RBP23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 SLC25A43Q8WUT9 341 aaPredicted RBP23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 NXPE2Q96DL1 559 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 LGALS12Q96DT0 336 aa23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 DIMT1Q9UNQ2 313 aaKnown RBP23.75■■□□□ 1.39
ATPAF1-202ENST00000371937 FTCDNL1E5RQL4 147 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 RAB36O95755 333 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 TFPIP10646 304 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 DCKP27707 260 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 GRPRP30550 384 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 TMED1Q13445 227 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 CRMP1Q14194 572 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 ATP1A1-AS1Q5TC04 95 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 NIPAL3Q6P499 406 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 MEPCEQ7L2J0 689 aaKnown RBP23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 GTPBP8Q8N3Z3 284 aaPredicted RBP23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 SLC37A3Q8NCC5 494 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 ATP6V1C2Q8NEY4 427 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 BBS1Q8NFJ9 593 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 PTP4A1Q93096 173 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 KLHL1Q9NR64 748 aa23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 MRPL39Q9NYK5 338 aaKnown RBP23.74■■□□□ 1.39
ATPAF1-202ENST00000371937 EFNA2O43921 213 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 GTF2E2P29084 291 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 IDUAP35475 653 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 DNASE1L1P49184 302 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 CLK1P49759 484 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 SOX8P57073 446 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 SELENBP1Q13228 472 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 EMC4Q5J8M3 183 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 ARMC4Q5T2S8 1044 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 TUBA3EQ6PEY2 450 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 CLVS1Q8IUQ0 354 aaPredicted RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 OR52I1Q8NGK6 324 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 OR4K13Q8NH42 304 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 DNAJA3Q96EY1 480 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 ARL5BQ96KC2 179 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 FGF20Q9NP95 211 aaPredicted RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 TAS2R5Q9NYW4 299 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 WARS2Q9UGM6 360 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 DKKL1Q9UK85 242 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 ARGFXA6NJG6 315 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 SLC22A31A6NKX4 558 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 OR6A2O95222 327 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 F13BP05160 661 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 CNR1P21554 472 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 GP2P55259 537 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 RSPO4Q2I0M5 234 aaPredicted RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 SCAIQ8N9R8 606 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 MED20Q9H944 212 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 RSL24D1Q9UHA3 163 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 ERGIC3Q9Y282 383 aa23.73■■□□□ 1.39
ATPAF1-202ENST00000371937 CPAMD8Q8IZJ3 1885 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 TRABD2BA6NFA1 517 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 H3BML4 177 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 TXNDC12O95881 172 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 ADORA3P0DMS8 318 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 IL11P20809 199 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 TCEA1P23193 301 aaKnown RBP23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 PSMB9P28065 219 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 SDHAP31040 664 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 GPR139Q6DWJ6 353 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 FAM122BQ7Z309 247 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 GRHPRQ9UBQ7 328 aa23.72■■□□□ 1.39
ATPAF1-202ENST00000371937 M0R082 166 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 ZNF701M0R085 212 aaPredicted RBP23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 LCKP06239 509 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 KLHL12Q53G59 568 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 AGAP7PQ5VUJ5 663 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 SPINK14Q6IE38 97 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 CYB561A3Q8NBI2 242 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 SDR9C7Q8NEX9 313 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 ZNF420Q8TAQ5 688 aaPredicted RBP23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 ZNF417Q8TAU3 575 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 DTNBP1Q96EV8 351 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 AGAP4Q96P64 663 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 ZNF587Q96SQ5 575 aaPredicted RBP23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 HCAR1Q9BXC0 346 aa23.71■■□□□ 1.39
ATPAF1-202ENST00000371937 DLL1O00548 723 aa23.7■■□□□ 1.39
ATPAF1-202ENST00000371937 PLPP3O14495 311 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms