RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 CRYABP02511 175 aaKnown RBP6.4□□□□□ -1.39
USP1-202ENST00000371146 FABP1P07148 127 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 UQCRC2P22695 453 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 ATP12AP54707 1039 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 CHRNB3Q05901 458 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 CRYZQ08257 329 aaKnown RBP6.4□□□□□ -1.39
USP1-202ENST00000371146 RIPPLY1Q0D2K3 151 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 IKZF1Q13422 519 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 ZIK1Q3SY52 487 aaPredicted RBP6.4□□□□□ -1.39
USP1-202ENST00000371146 ZMAT1Q5H9K5 638 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 PYHIN1Q6K0P9 492 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 MFSD12Q6NUT3 480 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 C3orf33Q6P1S2 294 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 KLHL24Q6TFL4 600 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 CHERPQ8IWX8 916 aaKnown RBP6.4□□□□□ -1.39
USP1-202ENST00000371146 RPRMLQ8N4K4 120 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 FBXO27Q8NI29 283 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 UBTD2Q8WUN7 234 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 NSMAFQ92636 917 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 LRRC58Q96CX6 371 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 ZNF347Q96SE7 839 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 G6PC3Q9BUM1 346 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 RBM24Q9BX46 236 aaKnown RBP6.4□□□□□ -1.39
USP1-202ENST00000371146 NANOGQ9H9S0 305 aa6.4□□□□□ -1.39
USP1-202ENST00000371146 ELOVL7A1L3X0 281 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 NKX2-6A6NCS4 301 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 FIGNL2A6NMB9 653 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 NUPL2O15504 423 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 KCNK2O95069 426 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 AKR7A3O95154 331 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SOX14O95416 240 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 AHSA1O95433 338 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 F13BP05160 661 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 MAGEA12P43365 314 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TNFSF10P50591 281 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SLC37A1P57057 533 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 ALG10BQ5I7T1 473 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 ZNF550Q7Z398 422 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 APCDD1LQ8NCL9 501 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 OR52N5Q8NH56 324 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 POC1BQ8TC44 478 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 PHF10Q8WUB8 498 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 FAR1Q8WVX9 515 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TM4SF19Q96DZ7 209 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 CITED4Q96RK1 184 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 ZFP64Q9NPA5 681 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 KLHL9Q9P2J3 617 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 A0A0G2JMP0 313 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 CENPVL1A0A0U1RR11 272 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 BLACEA4D250 179 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 LEUTXA8MZ59 168 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 NDUFS8O00217 210 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 RNF13O43567 381 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 HTR3BO95264 441 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 FGF4P08620 206 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 ACP2P11117 423 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 PRG2P13727 222 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TACR3P29371 465 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 GABRA4P48169 554 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 RIDAP52758 137 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 MFAP5Q13361 173 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 CEACAM7Q14002 265 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 QPRTQ15274 297 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SH2D5Q6ZV89 423 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 ZHX1-C8orf76Q96EF9 292 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 CCDC120Q96HB5 630 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TREX2Q9BQ50 279 aaPredicted RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 TMEM246Q9BRR3 403 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SPATA5L1Q9BVQ7 753 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 NPLQ9BXD5 320 aaPredicted RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 RNF121Q9H920 327 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 WDR54Q9H977 334 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SPACA1Q9HBV2 294 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 PNPLA3Q9NST1 481 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 FAM120CQ9NX05 1096 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 GLTPQ9NZD2 209 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 LIPGQ9Y5X9 500 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TMEM82A0PJX8 343 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 ZNF726A6NNF4 738 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TSPAN4O14817 238 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 EIF1BO60739 113 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 TIPRLO75663 272 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 PRKD3O94806 890 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 HOXD4P09016 255 aaPredicted RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 COX5BP10606 129 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 EIF1P41567 113 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 CASP3P42574 277 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 CLDN20P56880 219 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TRIM25Q14258 630 aaKnown RBP6.39□□□□□ -1.39
USP1-202ENST00000371146 PRICKLE4Q2TBC4 344 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 UGT3A2Q3SY77 523 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 C4orf17Q53FE4 359 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 HMBOX1Q6NT76 420 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 PLCZ1Q86YW0 608 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SLC34A3Q8N130 599 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 LGI4Q8N135 537 aa6.39□□□□□ -1.39
USP1-202ENST00000371146 SLC15A4Q8N697 577 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms