RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 EIF4EBP3O60516 100 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 GCM2O75603 506 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 LYPLA1O75608 230 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 TIAF1O95411 115 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 C9P02748 559 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 ALPIP09923 528 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 RAB40ALP0C0E4 278 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 HGFP14210 728 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ST6GAL1P15907 406 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 CCL11P51671 97 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 HMGA2P52926 109 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 UCNP55089 124 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 RANP62826 216 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 KCNJ2P63252 427 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 CDK3Q00526 305 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 PHKG1Q16816 387 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 FAM71E1Q6IPT2 247 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 C3orf33Q6P1S2 294 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ZNF655Q8N720 491 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 OR9G4Q8NGQ1 327 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 GDPD5Q8WTR4 605 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ADAMTS14Q8WXS8 1223 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 SGK494Q96LW2 274 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ZNF597Q96LX8 424 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 RNF145Q96MT1 663 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 KLHDC3Q9BQ90 382 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 ZNF559Q9BR84 538 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 RSPO3Q9BXY4 272 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 MS4A7Q9GZW8 240 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 CLPBQ9H078 707 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 AKTIPQ9H8T0 292 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 WDR41Q9HAD4 459 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 RANGRFQ9HD47 186 aaPredicted RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 DNAJC4Q9NNZ3 241 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 DNAJB12Q9NXW2 375 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 RDH8Q9NYR8 311 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 MYEF2Q9P2K5 600 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 ACSL5Q9ULC5 683 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 DYRK1BQ9Y463 629 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 NPTNQ9Y639 398 aa3.53□□□□□ -1.84
MCF2-203ENST00000370576 MDC1Q14676 2089 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 TNRC6AQ8NDV7 1962 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 SNRNP200O75643 2136 aaKnown RBP3.53□□□□□ -1.84
MCF2-203ENST00000370576 SMIM23A6NLE4 172 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NOTOA8MTQ0 251 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SERPINE3A8MV23 424 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PPIAL4DF5H284 164 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 LAMTOR5O43504 91 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 HPRP00739 348 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 THRAP10827 490 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PAX1P15863 534 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CD40LGP29965 261 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 SLC6A8P48029 635 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 AQP5P55064 265 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CSNK2A1P68400 391 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 CDH18Q13634 790 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 GTF2H2Q13888 395 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CCDC58Q4VC31 144 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 TIMM23BQ5SRD1 257 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 GPR107Q5VW38 600 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PRR27Q6MZM9 219 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 GTF2H2CQ6P1K8 395 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZFP1Q6P2D0 407 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 TMEM64Q6YI46 380 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ANKRD46Q86W74 232 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 DTX1Q86Y01 620 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 KMT5CQ86Y97 462 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 STHQ8IWL8 128 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZNF100Q8IYN0 542 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CDRT4Q8N9R6 151 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CSNK2A3Q8NEV1 391 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 OR5M8Q8NGP6 311 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PHF10Q8WUB8 498 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 TWIST2Q8WVJ9 160 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 OR8D1Q8WZ84 308 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CTHRC1Q96CG8 243 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 CMTM5Q96DZ9 223 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 C10orf90Q96M02 699 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 FNDC11Q9BVV2 318 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 DGCR6LQ9BY27 220 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 TPSD1Q9BZJ3 242 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ZNF703Q9H7S9 590 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 TRIM45Q9H8W5 580 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 BPIFA1Q9NP55 256 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 OR2S2Q9NQN1 319 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NECAP2Q9NVZ3 263 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 COA4Q9NYJ1 87 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NDRG3Q9UGV2 375 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 NDUFAF1Q9Y375 327 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 TBC1D3KA0A087X1G2 549 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 USP17L23D6RBM5 183 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 H7C1Q1 480 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 ETV2O00321 342 aaPredicted RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 RNASET2O00584 256 aaKnown RBP3.52□□□□□ -1.85
MCF2-203ENST00000370576 CCSO14618 274 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 RAB29O14966 203 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 PFDN6O15212 129 aa3.52□□□□□ -1.85
MCF2-203ENST00000370576 MID1O15344 667 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms