RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ASB9Q96DX5 294 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 PYURFQ96I23 114 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 LRGUKQ96M69 825 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF587Q96SQ5 575 aaPredicted RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 PRSS27Q9BQR3 290 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF426Q9BUY5 554 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ING1Q9UK53 422 aaPredicted RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 NOSIPQ9Y314 301 aaKnown RBP13.2□□□□□ -0.3
COL9A1-204ENST00000370496 CORINQ9Y5Q5 1042 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 ENPP4Q9Y6X5 453 aa13.2□□□□□ -0.3
COL9A1-204ENST00000370496 A8MXE2 369 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 VAMP5O95183 116 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 MT-ATP6P00846 226 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 CGAP01215 116 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 ITGA2P17301 1181 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 UGT2B15P54855 530 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
COL9A1-204ENST00000370496 HIST2H2BCQ6DN03 193 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 LINC00114Q6XXX2 140 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
COL9A1-204ENST00000370496 KIF18BQ86Y91 864 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 NKAIN4Q8IVV8 208 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 OR9K2Q8NGE7 335 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 OR6S1Q8NH40 331 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 TMEM239Q8WW34 195 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 MOGAT1Q96PD6 335 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 KLHL4Q9C0H6 718 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 FANCFQ9NPI8 374 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 SEC14L4Q9UDX3 406 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
COL9A1-204ENST00000370496 ENO4A6NNW6 628 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 LRRN3E7EW58 273 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 BGLAPP02818 100 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 FABP3P05413 133 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 UMPSP11172 480 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 POU2F1P14859 743 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 VLDLRP98155 873 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 SLC17A1Q14916 467 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 TRAM2Q15035 370 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF74Q16587 644 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 TFAP2EQ6VUC0 442 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF100Q8IYN0 542 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 SCAIQ8N9R8 606 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF610Q8N9Z0 462 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 PFN4Q8NHR9 129 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 APH1AQ96BI3 265 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 HS6ST2Q96MM7 605 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 SF3B5Q9BWJ5 86 aaKnown RBP13.18□□□□□ -0.3
COL9A1-204ENST00000370496 NANSQ9NR45 359 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 B3GALT5Q9Y2C3 310 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
COL9A1-204ENST00000370496 ASH1LQ9NR48 2969 aaKnown RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 FFAR1O14842 300 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 PIP5K1CO60331 668 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 FZD7O75084 574 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 MRPL33O75394 65 aaKnown RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 CH25HO95992 272 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 MT-ND1P03886 318 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 RHCEP18577 417 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 CD79BP40259 229 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 PEX19P40855 299 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 OR3A2P47893 321 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 SORDQ00796 357 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 SPIBQ01892 262 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 PMS2P3Q13401 168 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 SP5Q6BEB4 398 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF474Q6S9Z5 364 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 BEND4Q6ZU67 534 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 CCDC121Q6ZUS5 278 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 H1FNTQ75WM6 255 aaPredicted RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 NANOGNBQ7Z5D8 188 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 ADPRHL1Q8NDY3 354 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 C7orf34Q96L11 122 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 SEPHS2Q99611 448 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 PIP5K1AQ99755 562 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 FKRPQ9H9S5 495 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 PLSCR4Q9NRQ2 329 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 MRPL39Q9NYK5 338 aaKnown RBP13.17□□□□□ -0.3
COL9A1-204ENST00000370496 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
COL9A1-204ENST00000370496 DIRAS1O95057 198 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 PRSS23O95084 383 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 OR6A2O95222 327 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 SEMG1P04279 462 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 H1F0P07305 194 aaKnown RBP13.16□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF43P17038 809 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 IGFBP2P18065 325 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 P2RY4P51582 365 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 MS4A2Q01362 244 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 PUDPQ08623 228 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 SNTB1Q13884 538 aaKnown RBP13.16□□□□□ -0.3
COL9A1-204ENST00000370496 FLOT2Q14254 428 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 POU4F3Q15319 338 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF787Q6DD87 383 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms