RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 HIST1H2ACQ93077 130 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 BPIFA2Q96DR5 249 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 SLC19A3Q9BZV2 496 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 ANKRD19PQ9H560 264 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 RNF122Q9H9V4 155 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 CHST11Q9NPF2 352 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 NANSQ9NR45 359 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 RNF6Q9Y252 685 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 AP4S1Q9Y587 144 aa12.4□□□□□ -0.42
TPM3-211ENST00000368531 SPENQ96T58 3664 aaKnown RBP12.4□□□□□ -0.42
TPM3-211ENST00000368531 KALRNO60229 2985 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 SH3PXD2BA1X283 911 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 AQP7P3A6NL99 342 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 HSPB2A8KAH6 182 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 C11orf98E9PRG8 122 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 DNPH1O43598 174 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 CYTIPO60759 359 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 ENTPD5O75356 428 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 KRT36O76013 467 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 OR7A10O76100 309 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 MT-ATP6P00846 226 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 SAGP10523 405 aaPredicted RBP12.39□□□□□ -0.43
TPM3-211ENST00000368531 MAKP20794 623 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 CEACAM8P31997 349 aaPredicted RBP12.39□□□□□ -0.43
TPM3-211ENST00000368531 SMSP52788 366 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 CTBP2P56545 445 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 H3F3AP84243 136 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 PRKCDQ05655 676 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 HSPB2Q16082 182 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 OR2A2Q6IF42 318 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 MTFR2Q6P444 385 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 H1FNTQ75WM6 255 aaPredicted RBP12.39□□□□□ -0.43
TPM3-211ENST00000368531 SLC46A3Q7Z3Q1 461 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 TUSC5Q8IXB3 177 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 CDK20Q8IZL9 346 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 RNF113BQ8IZP6 322 aaKnown RBP12.39□□□□□ -0.43
TPM3-211ENST00000368531 SLC43A2Q8N370 569 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 OR6S1Q8NH40 331 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 PIGXQ8TBF5 258 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 FAM46AQ96IP4 442 aaKnown RBP12.39□□□□□ -0.43
TPM3-211ENST00000368531 FUZQ9BT04 418 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 FKRPQ9H9S5 495 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 COQ3Q9NZJ6 369 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 KLHL9Q9P2J3 617 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 LYVE1Q9Y5Y7 322 aa12.39□□□□□ -0.43
TPM3-211ENST00000368531 POLEQ07864 2286 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 EFCAB9A8MZ26 197 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 BLOC1S5-TXNDC5H3BN57 136 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 OR10H3O60404 316 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 E2F6O75461 281 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 SERPINI2O75830 405 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 OR6A2O95222 327 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 ADORA3P0DMS8 318 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 HOXB6P17509 224 aaKnown RBP12.38□□□□□ -0.43
TPM3-211ENST00000368531 BMP5P22003 454 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 AHCYP23526 432 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 CTSSP25774 331 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 SRSF1Q07955 248 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■□□□□ 8.7
TPM3-211ENST00000368531 MFSD13AQ14CX5 517 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
TPM3-211ENST00000368531 TMEM201Q5SNT2 666 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 AMIGO2Q86SJ2 522 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 MRGPRGQ86SM5 289 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 LIX1LQ8IVB5 337 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 OR4C15Q8NGM1 316 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 OR5J2Q8NH18 312 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 MRPL39Q9NYK5 338 aaKnown RBP12.38□□□□□ -0.43
TPM3-211ENST00000368531 CORINQ9Y5Q5 1042 aa12.38□□□□□ -0.43
TPM3-211ENST00000368531 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
TPM3-211ENST00000368531 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 FAM90A27PA6NNH2 459 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 ZNF716A6NP11 495 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 MS4A18H0YCH9 400 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 PLPP3O14495 311 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 CLOCKO15516 846 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 HNRNPRO43390 633 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 SMNDC1O75940 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
TPM3-211ENST00000368531 CCNB2O95067 398 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 HPRP00739 348 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 ASAH2BP0C7U1 165 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 RNF224P0DH78 156 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 KIR2DL2P43627 348 aaPredicted RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 LIMS1P48059 325 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 P2RY4P51582 365 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 HMGA2P52926 109 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 C1DQ13901 141 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 MS4A18Q3C1V0 323 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 VWA1Q6PCB0 445 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 NUFIP2Q7Z417 695 aaKnown RBP12.37□□□□□ -0.43
TPM3-211ENST00000368531 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 TMEM179BQ7Z7N9 219 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 OR9Q2Q8NGE9 314 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 OR13C2Q8NGS9 318 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 OR51A7Q8NH64 312 aa12.37□□□□□ -0.43
TPM3-211ENST00000368531 LRTOMTQ8WZ04 291 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms