RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 HTR2AP28223 471 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 POU3F4P49335 361 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 RACK1P63244 317 aaKnown RBP10.8□□□□□ -0.68
COPA-202ENST00000368069 HSD11B2P80365 405 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 GPR176Q14439 515 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 Q499Y3 187 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 NIPAL3Q6P499 406 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 NLGN4YQ8NFZ3 816 aaPredicted RBP10.8□□□□□ -0.68
COPA-202ENST00000368069 PCNPQ8WW12 178 aaKnown RBP10.8□□□□□ -0.68
COPA-202ENST00000368069 TMEM106AQ96A25 262 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 TCTN2Q96GX1 697 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 PHB2Q99623 299 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 LYRM4Q9HD34 91 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 CUTCQ9NTM9 273 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 PTTG3PQ9NZH4 202 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 KCNIP3Q9Y2W7 256 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 FGF17O60258 216 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 APOC1P02654 83 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 THBS1P07996 1170 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 MED25Q71SY5 747 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 OR5H2Q8NGV7 314 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 NPRL2Q8WTW4 380 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 ASB12Q8WXK4 309 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 PLA2G12AQ9BZM1 189 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 NPFFR2Q9Y5X5 522 aa10.8□□□□□ -0.68
COPA-202ENST00000368069 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 KDM4EB2RXH2 506 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 KIAA1024LP59773 190 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TDGQ13569 410 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TPBGQ13641 420 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 PDSS1Q5T2R2 415 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 APH1BQ8WW43 257 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 GIMAP5Q96F15 307 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 LMAN1LQ9HAT1 526 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 ISYNA1Q9NPH2 558 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 NCDNQ9UBB6 729 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 MBD1Q9UIS9 605 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 A4GNTQ9UNA3 340 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 MOKQ9UQ07 419 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 RNF215Q9Y6U7 377 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TRABD2BA6NFA1 517 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 B4DXG7 233 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 VEGFCP49767 419 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 PLGLB1Q02325 96 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TMEM244Q5VVB8 128 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TMEM215Q68D42 235 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 KIAA0895LQ68EN5 471 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 C12orf73Q69YU5 71 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 PARM1Q6UWI2 310 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 NDUFAF7Q7L592 441 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 PXKQ7Z7A4 578 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 CCDC190Q86UF4 302 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 OR13H1Q8NG92 308 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 ARHGAP9Q9BRR9 750 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TMEM43Q9BTV4 400 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 SRRQ9GZT4 340 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 CMC2Q9NRP2 79 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 SURF4O15260 269 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 MAOAP21397 527 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 HTR3AP46098 478 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 RAP2BP61225 183 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 SELENBP1Q13228 472 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 ZC3H10Q96K80 434 aaKnown RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 Q96M85 177 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 CTRCQ99895 268 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 ZNF304Q9HCX3 659 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 FGF20Q9NP95 211 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 PCDHB16Q9NRJ7 776 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 MUTYHQ9UIF7 546 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 A0A0A6YYD5 115 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TMEM269A0A1B0GVZ9 245 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 EFCAB7A8K855 629 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 ZNF593O00488 134 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 DNAJB6O75190 326 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 CRTAPO75718 401 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 OPN1LWP04000 364 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 HOXC12P31275 282 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TRHRP34981 398 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 HCCSP53701 268 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 SMAD2Q15796 467 aaKnown RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 PRSS45Q7RTY3 260 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 OR6V1Q8N148 313 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 C12orf45Q8N5I9 185 aaPredicted RBP10.79□□□□□ -0.68
COPA-202ENST00000368069 GALNT6Q8NCL4 622 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 PATE1Q8WXA2 126 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 ASB17Q8WXJ9 295 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 OR5B2Q96R09 309 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 MAP3K3Q99759 626 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 SLC6A20Q9NP91 592 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 KCNN3Q9UGI6 736 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 NOX1Q9Y5S8 564 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 KCNE3Q9Y6H6 103 aa10.79□□□□□ -0.68
COPA-202ENST00000368069 TMEM212A6NML5 194 aa10.78□□□□□ -0.68
COPA-202ENST00000368069 RFXAPO00287 272 aa10.78□□□□□ -0.68
COPA-202ENST00000368069 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
COPA-202ENST00000368069 CD14P08571 375 aa10.78□□□□□ -0.68
COPA-202ENST00000368069 RAB3AP20336 220 aa10.78□□□□□ -0.68
COPA-202ENST00000368069 CD6P30203 668 aa10.78□□□□□ -0.68
COPA-202ENST00000368069 DLSTP36957 453 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms