RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 MOSPD2Q8NHP6 518 aa9.7□□□□□ -0.86
SMC3-201ENST00000361804 KCTD12Q96CX2 325 aaKnown RBP9.7□□□□□ -0.86
SMC3-201ENST00000361804 Q96M85 177 aa9.7□□□□□ -0.86
SMC3-201ENST00000361804 TIMM29Q9BSF4 260 aa9.7□□□□□ -0.86
SMC3-201ENST00000361804 KRCC1Q9NPI7 259 aaPredicted RBP9.7□□□□□ -0.86
SMC3-201ENST00000361804 NCDNQ9UBB6 729 aa9.7□□□□□ -0.86
SMC3-201ENST00000361804 MGAT4CQ9UBM8 478 aa9.7□□□□□ -0.86
SMC3-201ENST00000361804 BLOC1S5-TXNDC5H3BN57 136 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 FMO6PO60774 539 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 KHDRBS3O75525 346 aaKnown RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 OR7A10O76100 309 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 GAAP10253 952 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 SRMP19623 302 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 MAT1AQ00266 395 aaKnown RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 GPR18Q14330 331 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 EIPR1Q53HC9 387 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 ZNF782Q6ZMW2 699 aaPredicted RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 BTN2A1Q7KYR7 527 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 ELMOD3Q96FG2 381 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 RSPH9Q9H1X1 276 aaPredicted RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 S1PR5Q9H228 398 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 TCEAL2Q9H3H9 227 aaPredicted RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 TMEM27Q9HBJ8 222 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 SLCO1B1Q9Y6L6 691 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 TGFBR3LH3BV60 316 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 DCTN6O00399 190 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 CBX7O95931 251 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 RPS4Y1P22090 263 aaKnown RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 ADPRHP54922 357 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 MGAT2Q10469 447 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 ZMYND11Q15326 602 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 PRICKLE4Q2TBC4 344 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 FIGLAQ6QHK4 219 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 ALKAL2Q6UX46 152 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 KIAA1324Q6UXG2 1013 aaKnown RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 RNF44Q7L0R7 432 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 TPRA1Q86W33 373 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 OR9A4Q8NGU2 314 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 SMIM4Q8WVI0 70 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 LRIT1Q9P2V4 623 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 KCNN3Q9UGI6 736 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 LINC00862A6NCI5 91 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 BRINP1O60477 761 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 MAS1P04201 325 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 F13BP05160 661 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 TYRP1P17643 537 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 KIAA1024LP59773 190 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 PSG6Q00889 435 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 CDH24Q86UP0 819 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 SYNPRQ8TBG9 265 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 PHOSPHO2Q8TCD6 241 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 DMRTA2Q96SC8 542 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 CNN2Q99439 309 aaKnown RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 ELF4Q99607 663 aaPredicted RBP9.69□□□□□ -0.86
SMC3-201ENST00000361804 KLF15Q9UIH9 416 aa9.69□□□□□ -0.86
SMC3-201ENST00000361804 TCRBV16S1A1N1A0A5B0 115 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 TSPAN4O14817 238 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 THBS1P07996 1170 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 POMZP3Q6PJE2 187 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 USP53Q70EK8 1073 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 GALNT11Q8NCW6 608 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 OR4C3Q8NH37 302 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 CLEC4MQ9H2X3 399 aaPredicted RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 DNAJB12Q9NXW2 375 aaKnown RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 RDH8Q9NYR8 311 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 HCN3Q9P1Z3 774 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 CHRNA9Q9UGM1 479 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 ARID1AO14497 2285 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 TMEM72A0PK05 275 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 M0R233 179 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 PEX14O75381 377 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 ADRA2CP18825 462 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 GALP22466 123 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 CDK2P24941 298 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 LCN1P31025 176 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 TLX1P31314 330 aaPredicted RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 GBX2P52951 348 aaPredicted RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 AP2S1P53680 142 aaPredicted RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 RPS15AP62244 130 aaKnown RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 ANGPT1Q15389 498 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 LINC00052Q96N35 136 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 OR2M4Q96R27 311 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 SARGQ9BW04 601 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 RAB11FIP5Q9BXF6 653 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 KIR3DX1Q9H7L2 352 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 SRA1Q9HD15 236 aaKnown RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 MYEF2Q9P2K5 600 aaKnown RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 SHOXO15266 292 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 WISP1O95388 367 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 RPS21P63220 83 aaKnown RBP9.68□□□□□ -0.86
SMC3-201ENST00000361804 HSF2Q03933 536 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 SHHQ15465 462 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 CDONQ4KMG0 1287 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 OR5M1Q8NGP8 315 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 C1orf216Q8TAB5 229 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 NR4A3Q92570 626 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 PPP1R14AQ96A00 147 aa9.68□□□□□ -0.86
SMC3-201ENST00000361804 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms