RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CFAP73A6NFT4 308 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 NR5A2O00482 541 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 AP3D1O14617 1153 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 SCN2BO60939 215 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CHRNGP07510 517 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 ADRA2AP08913 450 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 UQCRC2P22695 453 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CXCR1P25024 350 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 GPR6P46095 362 aaPredicted RBP11.96□□□□□ -0.49
VPS29-201ENST00000360579 EVX1P49640 407 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 SELENOPP49908 381 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 ARFIP2P53365 341 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CLDN8P56748 225 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 TUBA1BP68363 451 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 TUBA4AP68366 448 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 SLC9B1Q4ZJI4 515 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 GPAT3Q53EU6 434 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 PRR31Q5SQ13 230 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 REP15Q6BDI9 236 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 TNFAIP8L2Q6P589 184 aaPredicted RBP11.96□□□□□ -0.49
VPS29-201ENST00000360579 TUBA1AQ71U36 451 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CCDC36Q8IYA8 594 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CLECL1Q8IZS7 167 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 VPS37AQ8NEZ2 397 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CNOT9Q92600 299 aaKnown RBP11.96□□□□□ -0.49
VPS29-201ENST00000360579 RAB8BQ92930 207 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 ZG16BQ96DA0 208 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 PPCSQ9HAB8 311 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 CMAHPQ9Y471 501 aa11.96□□□□□ -0.49
VPS29-201ENST00000360579 TRRAPQ9Y4A5 3859 aa11.96□□□□□ -0.5
VPS29-201ENST00000360579 IGHV2OR16-5A0A0B4J2B6 119 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 SYNGR3O43761 229 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 SAGP10523 405 aaPredicted RBP11.95□□□□□ -0.5
VPS29-201ENST00000360579 G6PDP11413 515 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 KRT4P19013 534 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 ACHEP22303 614 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 PLAURQ03405 335 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 FUT5Q11128 374 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 DAG1Q14118 895 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 ANXA8L1Q5VT79 327 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 OR4F3Q6IEY1 312 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 NIPAL3Q6P499 406 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 CREB3L2Q70SY1 520 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 IFT20Q8IY31 132 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 ZNF440Q8IYI8 595 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 CDK20Q8IZL9 346 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 OR8J2Q8NGG1 315 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 CLDND2Q8NHS1 167 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 TUBGCP3Q96CW5 907 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 LRRC37BQ96QE4 947 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 SEC61A2Q9H9S3 476 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 ADPRHL2Q9NX46 363 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 NOP53Q9NZM5 478 aaKnown RBP11.95□□□□□ -0.5
VPS29-201ENST00000360579 RASD1Q9Y272 281 aa11.95□□□□□ -0.5
VPS29-201ENST00000360579 NUP214P35658 2090 aaPredicted RBP11.95□□□□□ -0.5
VPS29-201ENST00000360579 TRAV20A0A0B4J274 112 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 AGAP5A6NIR3 686 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 A8MVM7 634 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 RPL36A-HNRNPH2H7BZ11 118 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 M0R233 179 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 UPK3AO75631 287 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 PNPP00491 289 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 ANPEPP15144 967 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 IL7RP16871 459 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 EPHA1P21709 976 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 CHI3L1P36222 383 aaPredicted RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 SERPINB5P36952 375 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 TMEM33P57088 247 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 TXNL4AP83876 142 aaKnown RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 ROR2Q01974 943 aaKnown RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 EMX2Q04743 252 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 EPS8Q12929 822 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 SNTB2Q13425 540 aaKnown RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 PRAMEF8Q5VWM4 474 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 PRAMEF7Q5VXH5 474 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 SAXO2Q658L1 398 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 FAHD2BQ6P2I3 314 aaPredicted RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 HMGN2P46Q86SG4 172 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 AGR3Q8TD06 166 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 RDH5Q92781 318 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 NEURL3Q96EH8 262 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 FAHD2AQ96GK7 314 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 C3orf30Q96M34 536 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
VPS29-201ENST00000360579 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 DPY30Q9C005 99 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 NELFAQ9H3P2 528 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 TPK1Q9H3S4 243 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 ZNF696Q9H7X3 374 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 NOX3Q9HBY0 568 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 ASIC5Q9NY37 505 aa11.94□□□□□ -0.5
VPS29-201ENST00000360579 REV1Q9UBZ9 1251 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms