RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FAM189BP81408 668 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZXDBP98169 803 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 DEFB134Q4QY38 66 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF836Q6ZNA1 936 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 Q6ZNX1 250 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 WDR5BQ86VZ2 330 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 RNF175Q8N4F7 328 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 EMC9Q9Y3B6 208 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZFP92A6NM28 416 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 PSMB3P49720 205 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 HHEXQ03014 270 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 KCNRGQ8N5I3 272 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 OR52B6Q8NGF0 335 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 FAM103A1Q9BTL3 118 aaKnown RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM43Q9BTV4 400 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 GPR174Q9BXC1 333 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC22A11Q9NSA0 550 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 DNAJC15Q9Y5T4 150 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 LRIT2A6NDA9 550 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 GPR17Q13304 367 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 LARP4Q71RC2 724 aaKnown RBP eCLIP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 OR52N2Q8NGI0 321 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 V9GYS6 101 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF860A6NHJ4 632 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC31A2O15432 143 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 FUCA1P04066 466 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 FKBP2P26885 142 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HLA-FP30511 346 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HOXA1P49639 335 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HSF1Q00613 529 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 LYSMD2Q8IV50 215 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HUS1BQ8NHY5 278 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 TAF9BQ9HBM6 251 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 RIMS3Q9UJD0 308 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 POU3F2P20265 443 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PRDX3P30048 256 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 RPE65Q16518 533 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 TIPARPQ7Z3E1 657 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 CADM3Q8N126 398 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 OR8J2Q8NGG1 315 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 OR7D2Q96RA2 312 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PEBP4Q96S96 227 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HIDE1A8MVS5 230 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 RANP62826 216 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 SHEQ5VZ18 495 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 GRASPQ7Z6J2 395 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PDZD3Q86UT5 571 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 METTL27Q8N6F8 245 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PRRC1Q96M27 445 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 DHRS9Q9BPW9 319 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 LIN7BQ9HAP6 207 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 HRASLSQ9HDD0 168 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PI4KAP42356 2102 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 GCSHP23434 173 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 OR4D1Q15615 310 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 CMTM8Q8IZV2 173 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 KLF8O95600 359 aaPredicted RBP12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 GAREM1Q9H706 876 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 CHRNA9Q9UGM1 479 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
SRGAP3-201ENST00000360413 PAX6P26367 422 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 GDNFP39905 211 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TEAD2Q15562 447 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC36A2Q495M3 483 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 VGLL2Q8N8G2 317 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 IL1F10Q8WWZ1 152 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ZCCHC4Q9H5U6 513 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 OBP2BQ9NPH6 170 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PCDHA9Q9Y5H5 950 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 LEFTY2O00292 366 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 GLCEO94923 617 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 DTYMKP23919 212 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 KIR2DS3Q14952 304 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF684Q5T5D7 378 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 FRMPD2BQ6IN97 320 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ADGRG5Q8IZF4 528 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 POFUT1Q9H488 388 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 DDX31Q9H8H2 851 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 CPOXP36551 454 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF133P52736 654 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 CASP7P55210 303 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms