RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PSG6Q00889 435 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 GALEQ14376 348 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SCGB2B2Q4G0G5 96 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 AADACL4Q5VUY2 407 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 VASNQ6EMK4 673 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 RDH10Q8IZV5 341 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 ASCC1Q8N9N2 400 aaKnown RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 LMF2Q9BU23 707 aaKnown RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 SERINC1Q9NRX5 453 aa13.07□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF346Q9UL40 294 aaKnown RBP13.07□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF726A6NNF4 738 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 MT-ND4P03905 459 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 IGHV4-34P06331 123 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 CSF3P09919 207 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 SRFP11831 508 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 STOMP27105 288 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 GALK2Q01415 458 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ATAD3CQ5T2N8 411 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF782Q6ZMW2 699 aaPredicted RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 RBP7Q96R05 134 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 CMKLR1Q99788 373 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 OR11A1Q9GZK7 315 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ITGB1BP2Q9UKP3 347 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 SATB2Q9UPW6 733 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 FARSAQ9Y285 508 aaKnown RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 SMLR1H3BR10 107 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 CYR61O00622 381 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 PRICKLE3O43900 615 aaPredicted RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 OR2T7P0C7T2 308 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 CCR5P51681 352 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 SNRPNP63162 240 aaKnown RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF658BQ4V348 819 aaPredicted RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 KCTD18Q6PI47 426 aaPredicted RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 OR2T27Q8NH04 317 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 AKAP1Q92667 903 aaKnown RBP eCLIP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 OR6C1Q96RD1 312 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 PCDHGB2Q9Y5G2 931 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 EFCAB7A8K855 629 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 KRT33AO76009 404 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 CD14P08571 375 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 S1PR1P21453 382 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 MAPK3P27361 379 aaPredicted RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 AFF3P51826 1226 aaKnown RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 TLE3Q04726 772 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 IRF3Q14653 427 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 PYHIN1Q6K0P9 492 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 LRRN1Q6UXK5 716 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF227Q86WZ6 799 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF101Q8IZC7 436 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 LGALS14Q8TCE9 139 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 TMEM14AQ9Y6G1 99 aa13.06□□□□□ -0.32
SIRPA-202ENST00000358771 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 NKX2-2O95096 273 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 S100A1P23297 94 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 EEF1A1P68104 462 aaKnown RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 C4orf46Q504U0 113 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ABI3BPQ7Z7G0 1075 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 PM20D2Q8IYS1 436 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SMRP1Q8NCR6 262 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 OR6N1Q8NGY5 312 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 OR2AJ1Q8NGZ0 328 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 BRIX1Q8TDN6 353 aaKnown RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 GIMAP5Q96F15 307 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 INTS14Q96SY0 518 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SRRQ9GZT4 340 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SLCO1B1Q9Y6L6 691 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 MDC1Q14676 2089 aaKnown RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ICOSLGO75144 302 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 FOSL2P15408 326 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 HSD11B1P28845 292 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 DNAAF1Q8NEP3 725 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 C17orf47Q8NEP4 570 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 KLHL15Q96M94 604 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 POLHQ9Y253 713 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 IDSB3KWA1 339 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 EPPINO95925 133 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 RECKO95980 971 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 UCHL1P09936 223 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SELENBP1Q13228 472 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 SF3B4Q15427 424 aaKnown RBP eCLIP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 OR8H3Q8N146 312 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ZNF431Q8TF32 576 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 HLA-CQ95604 372 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 OMA1Q96E52 524 aa13.05□□□□□ -0.32
SIRPA-202ENST00000358771 ATG5Q9H1Y0 275 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms