RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PELI2Q9HAT8 420 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 PLSCR3Q9NRY6 295 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CLEC2DQ9UHP7 191 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 CSF3P09919 207 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 RNH1P13489 461 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 FOLR1P15328 257 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ANXA7P20073 488 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SNCAP37840 140 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 MEX3DQ86XN8 651 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CMTM8Q8IZV2 173 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 KLK6Q92876 244 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 HIPK2Q9H2X6 1198 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 USP22Q9UPT9 525 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF860A6NHJ4 632 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 TGOLN2O43493 480 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ADH1BP00325 375 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ITGB2P05107 769 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 IGFBP1P08833 259 aaPredicted RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 TGM1P22735 817 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SLC14A1Q13336 389 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ARHGAP19Q14CB8 494 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GPRIN1Q7Z2K8 1008 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 MITD1Q8WV92 249 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 OR1E3Q8WZA6 343 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 DDIT4LQ96D03 193 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 DPH7Q9BTV6 452 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 TRAV27A0A087WT01 109 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 A6NIZ1 184 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PPP6CO00743 305 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 TNFP01375 233 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GALTP07902 379 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SRP9P49458 86 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 RAB13P51153 203 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 RAP1BP61224 184 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PDE7AQ13946 482 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CTF1Q16619 201 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 Q499Y3 187 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CST9LP1Q5W188 147 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 DPPA4Q7L190 304 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 RNF113BQ8IZP6 322 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ARFGAP1Q8N6T3 406 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GATSQ8NAP1 163 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SDR9C7Q8NEX9 313 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CREB3L4Q8TEY5 395 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GCM1Q9NP62 436 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 TAAR5O14804 337 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PRSS56P0CW18 603 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 IRF2P14316 349 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF43P17038 809 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SEC13P55735 322 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 MLC1Q15049 377 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 TAF9Q16594 264 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CLEC9AQ6UXN8 241 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ERN2Q76MJ5 926 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CTU1Q7Z7A3 348 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 RCBTB1Q8NDN9 531 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SLC38A5Q8WUX1 472 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PATZ1Q9HBE1 687 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF443Q9Y2A4 671 aaPredicted RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SLC35A3Q9Y2D2 325 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 J3QR89 54 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GLYR1Q49A26 553 aaPredicted RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF534Q76KX8 674 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 OR9A2Q8NGT5 310 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SYT17Q9BSW7 474 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 DUSP21Q9H596 190 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 YIPF1Q9Y548 306 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 LOC100289279A0A1B0GTE1 492 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CBY3A6NI87 242 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GFRA2O00451 464 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 RGS13O14921 159 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SERINC5Q86VE9 423 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CDRT4Q8N9R6 151 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 OR56B1Q8NGI3 324 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 OR5M8Q8NGP6 311 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 ARNT2Q9HBZ2 717 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 C19orf25Q9UFG5 118 aaPredicted RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CHRNA9Q9UGM1 479 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 APC2O95996 2303 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 FER1L5A0AVI2 2057 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 MEOX2P50222 304 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PLP2Q04941 152 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 PLCXD2Q0VAA5 305 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 MRPL49Q13405 166 aaKnown RBP8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CARD17Q5XLA6 110 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 MDGA2Q7Z553 956 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 NANOGP1Q8N7R0 232 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 SEC22AQ96IW7 307 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 DNAJC5Q9H3Z4 198 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 GAB2Q9UQC2 676 aa8.18□□□□□ -1.1
COL6A6-201ENST00000358511 CD300LBA8K4G0 201 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 KCNK5O95279 499 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SLC10A3P09131 477 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 HTR2CP28335 458 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM106AQ96A25 262 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms