RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 CNOT3O75175 753 aaKnown RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 SLC43A1O75387 559 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 AKR7A3O95154 331 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 LY86O95711 162 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 CBX7O95931 251 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 OPN1SWP03999 348 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 JUNBP17275 347 aaPredicted RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 PRPS1L1P21108 318 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ATP6V1B2P21281 511 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 SRD5A2P31213 254 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 GNALP38405 381 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 SLC26A3P40879 764 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 CDK9P50750 372 aaKnown RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 RPS23P62266 143 aaKnown RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 OR8B8Q15620 311 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ARL13AQ5H913 290 aaPredicted RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 DEFB121Q5J5C9 76 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 VWA1Q6PCB0 445 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ZNF730Q6ZMV8 503 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 C17orf107Q6ZR85 190 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 THAP5Q7Z6K1 395 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 PATL1Q86TB9 770 aaKnown RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 RNF130Q86XS8 419 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 GPALPP1Q8IXQ4 340 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 SLC43A2Q8N370 569 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ZSCAN4Q8NAM6 433 aaPredicted RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 SMYD1Q8NB12 490 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 GOLM1Q8NBJ4 401 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 PCYOX1LQ8NBM8 494 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 OR4N2Q8NGD1 307 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ABHD3Q8WU67 409 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 OR51I1Q9H343 314 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ZNF556Q9HAH1 456 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 NEK6Q9HC98 313 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ABCB10Q9NRK6 738 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 ST6GALNAC2Q9UJ37 374 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 LSM2Q9Y333 95 aaKnown RBP3.4□□□□□ -1.87
SMC1B-201ENST00000357450 CMAHPQ9Y471 501 aa3.4□□□□□ -1.87
SMC1B-201ENST00000357450 TCRBV16S1A1N1A0A5B0 115 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 ELOVL7A1L3X0 281 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 CFAP73A6NFT4 308 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 GGT3PA6NGU5 568 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 A6NNC1 897 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 FTCDNL1E5RQL4 147 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 M0R233 179 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SURF4O15260 269 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 HCN1O60741 890 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 GLI4P10075 376 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SLC1A6P48664 564 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PDLIM4P50479 330 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PCBP3P57721 371 aaKnown RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 IRX1P78414 480 aaPredicted RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 HOXC5Q00444 222 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SELPLGQ14242 412 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 HFEQ30201 348 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SHEQ5VZ18 495 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 ZNF425Q6IV72 752 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 TMEM53Q6P2H8 277 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 FAM214BQ7L5A3 538 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 NR2C2APQ86WQ0 139 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 C17orf82Q86X59 251 aaPredicted RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 CCDC103Q8IW40 242 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 ABHD11Q8NFV4 315 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 CCDC124Q96CT7 223 aaKnown RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 ITCHQ96J02 903 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 TECTBQ96PL2 329 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 DMRTA2Q96SC8 542 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 THTPAQ9BU02 230 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SFXN3Q9BWM7 321 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PITHD1Q9GZP4 211 aaPredicted RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PNPOQ9NVS9 261 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 ARMC1Q9NVT9 282 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 P2RX2Q9UBL9 471 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PTGDR2Q9Y5Y4 395 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PRR14LQ5THK1 2151 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 A0A0G2JNJ9 132 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 A0A1W2PQ09 198 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 OR6C76A6NM76 312 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 CPSF4LA6NMK7 179 aaKnown RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 NME4O00746 187 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 IGHA1P01876 353 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SERPINE1P05121 402 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 NR2C1P13056 603 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 RRM2P31350 389 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 TGFBR1P36897 503 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 CLDN20P56880 219 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 EBPQ15125 230 aaKnown RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 KLHL12Q53G59 568 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SPATA46Q5T0L3 261 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 DCST2Q5T1A1 773 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 AVPI1Q5T686 147 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 C3orf33Q6P1S2 294 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SBSNQ6UWP8 590 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 NLRC3Q7RTR2 1065 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 OLIG3Q7RTU3 272 aa3.39□□□□□ -1.87
SMC1B-201ENST00000357450 PIWIL3Q7Z3Z3 882 aaKnown RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 LRRC56Q8IYG6 542 aaPredicted RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 RIBC1Q8N443 379 aaPredicted RBP3.39□□□□□ -1.87
SMC1B-201ENST00000357450 SLC16A11Q8NCK7 471 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms