RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TOXO94900 526 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 APOC3P02656 99 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TFP02787 698 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 HLA-DOBP13765 273 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PVRP15151 417 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF140P52738 457 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 BAXQ07812 192 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 SLC14A1Q13336 389 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PM20D1Q6GTS8 502 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 ADAMTSL4Q6UY14 1074 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TMEM163Q8TC26 289 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 BSCL2Q96G97 398 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 GINS3Q9BRX5 216 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 TRAV36DV7A0A075B6V5 113 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 SHISA7A6NL88 538 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PTGESO14684 152 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 ITGB8P26012 769 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PRDX3P30048 256 aaKnown RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 EDDM3BP56851 147 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 GPR18Q14330 331 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 OR1Q1Q15612 314 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 KCTD11Q693B1 232 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 SPARTQ8N0X7 666 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 INTS12Q96CB8 462 aaKnown RBP5.15□□□□□ -1.58
PTPRD-202ENST00000356435 ZNF778Q96MU6 729 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 FEVQ99581 238 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 GON7Q9BXV9 100 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 SIAEQ9HAT2 523 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 PADI1Q9ULC6 663 aa5.15□□□□□ -1.58
PTPRD-202ENST00000356435 ZCWPW2A0A1B0GU75 182 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 A8MV72 311 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 F6UZH7 168 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 SULT1C2O00338 296 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 LYRM1O43325 122 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 PAX6P26367 422 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CSN1S1P47710 185 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 KIAA1024LP59773 190 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 NCS1P62166 190 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CAMK2BQ13554 666 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 LTC4SQ16873 150 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 LDLRAD1Q5T700 205 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 RPL22L1Q6P5R6 122 aaKnown RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 COMMD7Q86VX2 200 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CATSPERDQ86XM0 798 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 GCNT2Q8N0V5 402 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 BRIX1Q8TDN6 353 aaKnown RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CHTF18Q8WVB6 975 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 MYLIPQ8WY64 445 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 USP36Q9P275 1121 aaKnown RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ZNF705FA8MVS1 300 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ZNF732B4DXR9 585 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 HCRTR1O43613 425 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ALOX12BO75342 701 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ABHD16AO95870 558 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ZNF705DP0CH99 300 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ZNF705BP0CI00 300 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 OR1D4P47884 311 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 NDUFAF7Q7L592 441 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 MAVSQ7Z434 540 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 SLC35F3Q8IY50 421 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 DTX3Q8N9I9 347 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CYB561A3Q8NBI2 242 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 NUDT22Q9BRQ3 303 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 TCEAL2Q9H3H9 227 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 GFOD1Q9NXC2 390 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 TMEM181Q9P2C4 612 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 DNMT3BQ9UBC3 853 aaKnown RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 HS3ST3A1Q9Y663 406 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 AIFM1O95831 613 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 NDUFB7P17568 137 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ARSDP51689 593 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 GPLD1P80108 840 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 PLA2G7Q13093 441 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ECM29Q5VYK3 1845 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CST9LP1Q5W188 147 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CPZQ66K79 652 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 TSPYL5Q86VY4 417 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 SORBS1Q9BX66 1292 aaKnown RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 C12orf49Q9H741 205 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ZNF395Q9H8N7 513 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 PRDM9Q9NQV7 894 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 PLCXD1Q9NUJ7 323 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 MYO10Q9HD67 2058 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 HMX2A2RU54 273 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 C1orf196B1AJZ1 125 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 TNFRSF10AO00220 468 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 HMGN2P05204 90 aaKnown RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CNR2P34972 360 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 ZNF133P52736 654 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CLDN6P56747 220 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 VEZF1Q14119 521 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 FXNQ16595 210 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 B3GLCTQ6Y288 498 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 WDR88Q6ZMY6 472 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 GPR26Q8NDV2 337 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 CHAC2Q8WUX2 184 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 OR7D2Q96RA2 312 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 SMCO4Q9NRQ5 59 aa5.15□□□□□ -1.59
PTPRD-202ENST00000356435 PLEKHM1Q9Y4G2 1056 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms