RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MTRF1O75570 445 aaKnown RBP16.03■□□□□ 0.16
NPAS3-202ENST00000356141 SNX4O95219 450 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 PSMD4P55036 377 aaKnown RBP16.03■□□□□ 0.16
NPAS3-202ENST00000356141 CTBP2P56545 445 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 TUBA1BP68363 451 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 QPRTQ15274 297 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 COL28A1Q2UY09 1125 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 C3orf38Q5JPI3 329 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 TUBA1AQ71U36 451 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 SLITRK4Q8IW52 837 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 KBTBD8Q8NFY9 601 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 OR10G3Q8NGC4 313 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 NAT6Q93015 286 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 ITPKCQ96DU7 683 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 B3GALT1Q9Y5Z6 326 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 SPENQ96T58 3664 aaKnown RBP16.03■□□□□ 0.16
NPAS3-202ENST00000356141 EML6Q6ZMW3 1958 aa16.03■□□□□ 0.16
NPAS3-202ENST00000356141 SHISA3A0PJX4 238 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 CDKN2AP42771 156 aaKnown RBP16.02■□□□□ 0.16
NPAS3-202ENST00000356141 C19orf57Q0VDD7 668 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 ANGPT1Q15389 498 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 KCNJ8Q15842 424 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 KLHL36Q8N4N3 616 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 C17orf47Q8NEP4 570 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 OR5J2Q8NH18 312 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 DNAJA4Q8WW22 397 aaPredicted RBP16.02■□□□□ 0.16
NPAS3-202ENST00000356141 UFD1Q92890 307 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 LPAR4Q99677 370 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 PALMDQ9NP74 551 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 AKIP1Q9NQ31 210 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 SEMA5BQ9P283 1151 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 STUB1Q9UNE7 303 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 CFL2Q9Y281 166 aa16.02■□□□□ 0.16
NPAS3-202ENST00000356141 RTTNQ86VV8 2226 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 A0A1B0GVC2 190 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 A0A1W2PRG6 482 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 CCDC182A6NF36 153 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 A6NIN4 97 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 OR7A10O76100 309 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 CER1O95813 267 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 TFP02787 698 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 PRKACBP22694 351 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 MLLT11Q13015 90 aaPredicted RBP16.02■□□□□ 0.15
NPAS3-202ENST00000356141 MELKQ14680 651 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 LINC00114Q6XXX2 140 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 OVCH1Q7RTY7 1134 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 RABEPKQ7Z6M1 372 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 LAX1Q8IWV1 398 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 MFSD4AQ8N468 514 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 ACBD7Q8N6N7 88 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 TOR1AIP2Q8NFQ8 470 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 WDR77Q9BQA1 342 aaPredicted RBP16.02■□□□□ 0.15
NPAS3-202ENST00000356141 ABCB9Q9NP78 766 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 NDUFB11Q9NX14 153 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 DAPK2Q9UIK4 370 aa16.02■□□□□ 0.15
NPAS3-202ENST00000356141 RPL18Q07020 188 aaKnown RBP16.01■□□□□ 0.15
NPAS3-202ENST00000356141 ALG10Q5BKT4 473 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 HMG20AQ9NP66 347 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 CLEC4AQ9UMR7 237 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 RALGAPA1Q6GYQ0 2036 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 DCHS1Q96JQ0 3298 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 SLC25A12O75746 678 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 RPP14O95059 124 aaKnown RBP16.01■□□□□ 0.15
NPAS3-202ENST00000356141 SP9P0CG40 484 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 ZNF74Q16587 644 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 ZNF322Q6U7Q0 402 aaPredicted RBP16.01■□□□□ 0.15
NPAS3-202ENST00000356141 CPEB2Q7Z5Q1 589 aaKnown RBP16.01■□□□□ 0.15
NPAS3-202ENST00000356141 ARHGAP9Q9BRR9 750 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 ZNF649Q9BS31 505 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 ADGRL4Q9HBW9 690 aa16.01■□□□□ 0.15
NPAS3-202ENST00000356141 FGF20Q9NP95 211 aaPredicted RBP16.01■□□□□ 0.15
NPAS3-202ENST00000356141 DOK2O60496 412 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 NRG3P56975 720 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 IL20RBQ6UXL0 311 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 UTS2BQ765I0 119 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 UBE2J2Q8N2K1 259 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 HTRA1Q92743 480 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 ARL5BQ96KC2 179 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 MMP25Q9NPA2 562 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 CHRNA9Q9UGM1 479 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 MRTO4Q9UKD2 239 aaKnown RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 ICAM5Q9UMF0 924 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 RPH3AQ9Y2J0 694 aaPredicted RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 TMEM200CA6NKL6 621 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 ARHGEF9O43307 516 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 TSPAN7P41732 249 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 GLYR1Q49A26 553 aaPredicted RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 SLC6A19Q695T7 634 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 CEP19Q96LK0 163 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 JSRP1Q96MG2 331 aaPredicted RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 TIMP4Q99727 224 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 PPIL3Q9H2H8 161 aaKnown RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 COPS3Q9UNS2 423 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 EXOSC1Q9Y3B2 195 aaKnown RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 SAGE2PA6NJ88 616 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 CASKO14936 926 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 SUSD5O60279 629 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 CPNE3O75131 537 aaKnown RBP16■□□□□ 0.15
NPAS3-202ENST00000356141 SBK2P0C263 348 aa16■□□□□ 0.15
NPAS3-202ENST00000356141 HLA-DOBP13765 273 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms