RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SIDT1Q9NXL6 827 aaKnown RBP16.72■□□□□ 0.27
COL18A1-202ENST00000355480 DUSP13Q9UII6 198 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 MOKQ9UQ07 419 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 HS3ST3A1Q9Y663 406 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 SOCS7O14512 581 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 SURF4O15260 269 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF749O43361 778 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 ITGB2P05107 769 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 GIFP27352 417 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 TAS2R46P59540 309 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 SCGB2A2Q13296 93 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 HBMQ6B0K9 141 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 LRRC28Q86X40 367 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-202ENST00000355480 C12orf45Q8N5I9 185 aaPredicted RBP16.72■□□□□ 0.27
COL18A1-202ENST00000355480 DECR2Q9NUI1 292 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 OBP2AQ9NY56 170 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 MYH6P13533 1939 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 VEGFCP49767 419 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 TPMTP51580 245 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 TNK1Q13470 666 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 AADACL3Q5VUY0 350 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 DESI1Q6ICB0 168 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 UBTD2Q8WUN7 234 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 FKRPQ9H9S5 495 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 RNF212BA8MTL3 300 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 ABLIM3O94929 683 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 TPOP07202 933 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 SLC35E2P0CK97 266 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 MBOAT2Q6ZWT7 520 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 BPIFB2Q8N4F0 458 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 UPRTQ96BW1 309 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 HHIPL1Q96JK4 782 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 SEMA3BQ13214 749 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 GPR19Q15760 415 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 SLAMF9Q96A28 289 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF355PQ9NSJ1 428 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 TSPAN11A1L157 253 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF587BE7ETH6 402 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 SOCS6O14544 535 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 P2RX6O15547 441 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 CATR1Q13166 79 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 UBE2NLQ5JXB2 153 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 FAM53CQ9NYF3 392 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 CDHR4A6H8M9 788 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 TPT1P13693 172 aaKnown RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 IRS1P35568 1242 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 KCTD11Q693B1 232 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 TBPL2Q6SJ96 375 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 S100A7AQ86SG5 101 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 TMEM212A6NML5 194 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 GPRIN2O60269 458 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 EIF1BO60739 113 aaKnown RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 NCR1O76036 304 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 RAB40ALP0C0E4 278 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF674Q2M3X9 581 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 C14orf28Q4W4Y0 310 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 Q6ZPB1 254 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 GLB1L2Q8IW92 636 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 OR2T11Q8NH01 316 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 RAB40AQ8WXH6 277 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 TM4SF18Q96CE8 201 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 PDXPQ96GD0 296 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 NDUFAF4Q9P032 175 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 PLEKHM1Q9Y4G2 1056 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 ACOD1A6NK06 481 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF814B7Z6K7 855 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 ALOX12BO75342 701 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 HLA-AP01891 365 aaKnown RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 BCL6P41182 706 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 TSFMP43897 325 aaKnown RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 CYB561P49447 251 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 DMWDQ09019 674 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 LRRC56Q8IYG6 542 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 L3MBTL4Q8NA19 623 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 MUL1Q969V5 352 aa16.71■□□□□ 0.27
COL18A1-202ENST00000355480 MRPS2Q9Y399 296 aaKnown RBP16.71■□□□□ 0.27
COL18A1-202ENST00000355480 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 KITLGP21583 273 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 EIF1P41567 113 aaKnown RBP16.71■□□□□ 0.26
COL18A1-202ENST00000355480 DYRK1AQ13627 763 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF813Q6ZN06 617 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 OR56B1Q8NGI3 324 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 OCSTAMPQ9BR26 566 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 NMNAT2Q9BZQ4 307 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 SLC19A3Q9BZV2 496 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 CDCP1Q9H5V8 836 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 CXorf36Q9H7Y0 433 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 SLC23A2Q9UGH3 650 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 EDARQ9UNE0 448 aa16.71■□□□□ 0.26
COL18A1-202ENST00000355480 MYH7P12883 1935 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 CTNSO60931 367 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 PRKAR1BP31321 381 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 SLC9A3R2Q15599 337 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 NMNAT3Q96T66 252 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 KCNJ16Q9NPI9 418 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 A0A1B0GX78 115 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 GABRB3P28472 473 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 TBCEQ15813 527 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM59Q9BXS4 323 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 GLIPR2Q9H4G4 154 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms